Transcript Information: R_Transcript_117112.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4040739195937
Replicate 21.8169875360258
Replicate 32.4228280149777
Condition 2: 8 Hour
Replicate 11.1772050455406
Replicate 22.580101750906
Replicate 31.3962777400298
Condition 3: 24 Hour
Replicate 13.3112221963035
Replicate 22.5448375642974
Replicate 32.1045869891247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117112.p1 GENE.R_Transcript_117112~~R_Transcript_117112.p1 ORF type:5prime_partial len:104 (+),score=5.48 R_Transcript_117112:3-314(+)
GACATTAATTTTCTGATGCCAGCTTTGACAAAGCGTAGAAAAGAAGCCTTCCATTCAGAATTGAGTAGGACTTCAGCACCGTCAGCTGATACTACAAAAAAGACATCCAACCACACAGGCGGGGAAGACAGTAACCAACCTGCATGGGCTCCATTACGCGACACTTTCATGTTAACAAACTCCAAAATGAAGGACTGGGATAAAATGGTGGTAAGAATTTTGATTTTTTTTTACCCTTTCATCTGTCGTCCAAGTCAAGTTTGTTCACATTATTTAGCATTTGGGCTGCTGGAAAGCTCCGGTTTTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117112.p1 GENE.R_Transcript_117112~~R_Transcript_117112.p1 ORF type:5prime_partial len:104 (+),score=5.48 R_Transcript_117112:3-314(+)
DINFLMPALTKRRKEAFHSELSRTSAPSADTTKKTSNHTGGEDSNQPAWAPLRDTFMLTNSKMKDWDKMVVRILIFFYPFICRPSQVCSHYLAFGLLESSGFC*

Click here to download the sequence:
Link to NCBI Protein BLAST