Transcript Information: R_Transcript_117113.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.888051920877
Replicate 24.0638000805738
Replicate 36.157725160256
Condition 2: 8 Hour
Replicate 14.2126219264078
Replicate 25.2896709731837
Replicate 37.2216085263905
Condition 3: 24 Hour
Replicate 15.9245954136011
Replicate 24.268759785273
Replicate 37.0605498989991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117113.p1 GENE.R_Transcript_117113~~R_Transcript_117113.p1 ORF type:internal len:93 (+),score=9.37 R_Transcript_117113:2-277(+)
CGTGCTTCAGAGCCCCAGGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGGAGAAAAGAAGCCTCCCATTCAGAAGTGAGTCGGACTTCAGCACCATCAGCTGATACTACAACGAAGGTTGGTTGTCCCAACCTAAGTTTCTCGGACTCTTCATTTCACCCCACCTATCCTGTCGGATTCTCGACACTCCGACATGGATATGACACTTGGACACTTCATTTTGGGCAAAAACTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117113.p1 GENE.R_Transcript_117113~~R_Transcript_117113.p1 ORF type:internal len:93 (+),score=9.37 R_Transcript_117113:2-277(+)
RASEPQVNKAQNAQKGLNPSRFKDAKALTKRRKEASHSEVSRTSAPSADTTTKVGCPNLSFSDSSFHPTYPVGFSTLRHGYDTWTLHFGQKL

Click here to download the sequence:
Link to NCBI Protein BLAST