Transcript Information: R_Transcript_117117.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5210800795599
Replicate 21.7496917013582
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 11.1659935689164
Replicate 20.79860292289948
Replicate 30.86436241049462
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 22.1005008467216
Replicate 31.3028395646963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117117.p1 GENE.R_Transcript_117117~~R_Transcript_117117.p1 ORF type:5prime_partial len:84 (+),score=12.83 R_Transcript_117117:2-253(+)
CGTGCTTCAGAGCCCCAGGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGGAGAAAAGAAGCCTCCCATTCAGAAGTGAGTCGGACTTCAGCACCATCAGCTGATACTACAACGAAGACATCCACACACACAGGCGGGGAAGGAAGTAAACAGGCGGGGAAGGAAGTAAACAACCTGCATGGGCTCCATTACGCGATACTTTCATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117117.p1 GENE.R_Transcript_117117~~R_Transcript_117117.p1 ORF type:5prime_partial len:84 (+),score=12.83 R_Transcript_117117:2-253(+)
RASEPQVNKAQNAQKGLNPSRFKDAKALTKRRKEASHSEVSRTSAPSADTTTKTSTHTGGEGSKQAGKEVNNLHGLHYAILSS*

Click here to download the sequence:
Link to NCBI Protein BLAST