Transcript Information: R_Transcript_117156.p1


Annotated TAIR IDAT4G13040.3
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7613720-7615310 | Forward length=246
E-Value3.3E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29922886811014
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.13380254069533
Replicate 20.12219061115402
Replicate 30.19837825814631
Condition 3: 24 Hour
Replicate 10.37635749553613
Replicate 20.12052054038567
Replicate 30.11960494364425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117156.p1 GENE.R_Transcript_117156~~R_Transcript_117156.p1 ORF type:5prime_partial len:183 (-),score=40.77 R_Transcript_117156:369-917(-)
GTAAATATTGATCAGGTCGATGACCCATCCGGAGGAATTGATATTGGTTCATTGATTGCTTCTGGTTCTAGCCAATCAAAAGATCAGAATAATGAACCAAATTTTTCTGGATCAACCTCATCAAGAGAGCAGAATGATCAACCTACTGCAGAGCAACAAGTAAAGCGGAAAAAGCAACACCGAAGAAGGCGTATGCAGAACCAAGAGCAATGTGTAATGAGAGGTGTTTACTTCAAGAATATGAAGTGGCAAGCAGCCATAAAGGTTGACAAGAAACAAATTCATCTTGGGACTGTTAGTTCACCAGAGGAAGCTGCCCATCTATATGACAGAGCTGCCTTTATGTGTGGCAGGGAACCCAATTTTGAGCTTCCAGAGTATGAGAAGCGAGAACTTAGAAAGTTCAAGTGGGATGAATTCTTGGCTATGACACGGCGTGCTATTACCTGCAAAAGTAATAATCTTACAGTTTTCCTCTTAAATTGTCATTTGTTGCTCTCTTTTAACATCCTGTCTCCATATGTCACTTCTACTAAGCTGCGCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117156.p1 GENE.R_Transcript_117156~~R_Transcript_117156.p1 ORF type:5prime_partial len:183 (-),score=40.77 R_Transcript_117156:369-917(-)
VNIDQVDDPSGGIDIGSLIASGSSQSKDQNNEPNFSGSTSSREQNDQPTAEQQVKRKKQHRRRRMQNQEQCVMRGVYFKNMKWQAAIKVDKKQIHLGTVSSPEEAAHLYDRAAFMCGREPNFELPEYEKRELRKFKWDEFLAMTRRAITCKSNNLTVFLLNCHLLLSFNILSPYVTSTKLRE*

Click here to download the sequence:
Link to NCBI Protein BLAST