Transcript Information: R_Transcript_117173.p1


Annotated TAIR IDAT3G29200.1
Annotated Gene Namechorismate mutase 1
Annotated Gene Symbol(s)CM1, ATCM1
Annotation TypeOrtholog
Chromosome Positionchr3:11164582-11166258 | Reverse length=340
E-Value5.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.17390831748
Replicate 293.54079349552
Replicate 398.576982224928
Condition 2: 8 Hour
Replicate 179.370590092154
Replicate 293.666480282118
Replicate 3105.76263525563
Condition 3: 24 Hour
Replicate 196.451221077382
Replicate 295.458984300393
Replicate 3102.32332531645


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117173.p1 GENE.R_Transcript_117173~~R_Transcript_117173.p1 ORF type:complete len:323 (+),score=70.02 R_Transcript_117173:448-1416(+)
ATGGAGGCTAAACTTTTGAATTCGGCTTCTCCAGTCCATTTTGCTACTCACATAACAAAGTTATCGAGACCCATTAATCAATTTTTTACCCACCAAGCTTGCCAAAATTGTAGCTTCGGCTCTTACAAACCCAGCTCCTTATTGAAGGCTATTCAACCTCTTAAAGTTTCTGCAAGTGCAACTGGTCTGCCCGCCAAGCCAAGAGTTGATGAGAGTGAAAGCTTAACTCTGGATGGTATTCGTTCCTCCTTAATTCGCCAAGAAGACAGTATCATATTCGGCCTTCTAGAGAGATCACAATATGCTTACAATACTGACACATATAACCCTGATGCATTTCCTTTGCATGGCTTTCATGGATCTCTTGTAGAGTATATGCTCATGGAAACTGAGAAGCTTCATGCTCAGGTGGGAAGGTATAAGAGCCCTGATGAGCATGCATTCTTTCCGGATGATCTACCTCAACCACTGTTGCCACCTTTACAGTATCCTCAGGTTCTGCAACCCTCTGCTGATTCCATAAATATAAACCGGAAAATTTGGGATGTGTACTTCAAAGATGTCCTGCCAAGACTTGTTCAGCATCATGATGATGGGAACTGTGGTTCATCTGCTGTCTGTGACACAATATGCTTACAGGCACTTTCAAAAAGAATACATTATGGTAAATATGTTGCAGAGGCAAAGTTTCGAGCCTCACCTGATATTTATACAGCTGCTATTGCATCACAAGACAGAGATCAATTGATGAAATTGCTCACATATGAGGCAGTGGAAGCTGCAGTGAAGAGGAGAGTTGAAATGAAAGCTAAAACATTTGGACTTCAGGTTCCTGCAAACCCAGATGCTGTAGAATCTGACCCAGGTTACAAAATTGCACCAAGCTTAGTTGCTGATCTATATGGGGACTGGATTATGCCATTAACAAAGGAGGTTCAAGTTGAGTATTTGTTGAGGAGGTTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117173.p1 GENE.R_Transcript_117173~~R_Transcript_117173.p1 ORF type:complete len:323 (+),score=70.02 R_Transcript_117173:448-1416(+)
MEAKLLNSASPVHFATHITKLSRPINQFFTHQACQNCSFGSYKPSSLLKAIQPLKVSASATGLPAKPRVDESESLTLDGIRSSLIRQEDSIIFGLLERSQYAYNTDTYNPDAFPLHGFHGSLVEYMLMETEKLHAQVGRYKSPDEHAFFPDDLPQPLLPPLQYPQVLQPSADSININRKIWDVYFKDVLPRLVQHHDDGNCGSSAVCDTICLQALSKRIHYGKYVAEAKFRASPDIYTAAIASQDRDQLMKLLTYEAVEAAVKRRVEMKAKTFGLQVPANPDAVESDPGYKIAPSLVADLYGDWIMPLTKEVQVEYLLRRLD*

Click here to download the sequence:
Link to NCBI Protein BLAST