Transcript Information: R_Transcript_117211.p1


Annotated TAIR IDAT1G15290.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5257327-5264814 | Reverse length=1608
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5794603504872
Replicate 20.79207600372861
Replicate 32.3043903689543
Condition 2: 8 Hour
Replicate 11.3489219012854
Replicate 20.97745172120153
Replicate 31.1738766149711
Condition 3: 24 Hour
Replicate 11.5809268450215
Replicate 20.92447192954516
Replicate 31.5203435590899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117211.p1 GENE.R_Transcript_117211~~R_Transcript_117211.p1 ORF type:complete len:1670 (+),score=341.81,TPR_12|PF13424.2|1.1e-08,TPR_12|PF13424.2|1e-14,TPR_12|PF13424.2|1.2e-10,eIF3_p135|PF12807.3|5.5e-21,TPR_10|PF13374.2|8.4,TPR_10|PF13374.2|1e-09,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|1.1e-06,TPR_10|PF13374.2|2.2,TPR_10|PF13374.2|2.7e+03,CLU_N|PF15044.2|7.3e-17,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|0.0024,TPR_2|PF07719.13|1.8e+02,TPR_2|PF07719.13|0.015,TPR_2|PF07719.13|10,TPR_2|PF07719.13|5.4 R_Transcript_117211:263-5272(+)
ATGGCCCCAAAATCAGGTCGCAGCAAGAATCACAAAAACAAGTCTGATAAGAAAAAGAAAGAAGAAAAAGTGGTGCCCAGTGTTATTGACATTACTGTCACGACCCCATATGATTCTCAAGTTACTCTCAAGGGTATATCAACTGATAAGATACTGGACATAAGAAGGTTGATAGCCTCAAATGTAGAAACTTGTCATATCACTAACTACTCATTGTCCCATGAGGTAAGGGGGCATAAACTAAGTGACAGAGTAGAGATAACTTCTCTGAAGCCATGTGTGCTGACTATGTTTGAAGAGGAATATGATAAAGAAGCCCAAGCGATGGCCCACGTGAGGAGGCTACTTGACATTGTTGCGTGTACAACGTGGTTCAGCAAGCCCAAGGGCCAGAGGCCGACATCAGCATACTCGAGATCGAAAAAGTCCAAATCTCAAAGCCCAATAAATGGAGGCCCACAATCAGCGAGCCGAGAACTCGGAATCAAAAATGGGCCGTCCGTTTCGATCATATCGGGAGAAAATGACATGGAAGCTCTCCACCCTACGCCCAAAATCTCGGAATTTTATGATTTCTTCTCGTTCTCTCATCTCACGCCACCTGTCCTATGCATTAAGAGATGTGAAAGAAAGGCTGAAGAGAAGCGTGATGGTGACTACTTTGAACTTCAGATCAAGATTTGCAACGGGAAGATAGTACAAGTGGTTGCTTCTACTAAAGGTTTTTACACCTTGGGCAAGCAGTCAATACAGAGTCACTCCCTGGTTGATCTTCTGCATCAACTTAGCCAAGCATTTGCCAATGCGTATGATTCCTTAATCAAAGCTTTTGTGGATCACAATAAGTTTGGTAATCTTCCATATGGATTTCGTGCAAATTGCTGGCTTACCCCTCCATCTGTTGCTGAATCTCCATCAAGATATCCACCCTTACCGATTGAGGATGAGAATTGGGGTGGCAATGGTGGAGGTCAAGGAAGAGATGGTGAACATGATCTTCGACCCTGGGCTACTGAGTTCGCAATACTGGCTTCCTTGCCCTGCAAAACTGAGGAGGAGAGACTGATACGTGACCGAAAGGCATTCTTGCTCCACAGTATATTTGTTGATGTGTCCATCTTTAAAGCAGTTAATACAATCCGCCAACTGATAACCTCTCATGCCAATTCAAGAGATTGTTTGCCTGGCTCAGTGGTGCATGAAAGCCGAGTAGGAGACCTGTCAATTGTAGTGAAACGTGATGCAGATGATGCTAACGTAAAGCCTACTGATAAACTCACTTGTGAACCTTCTGAAGTACCAGCTAGAGAAATTGTTAGGAGGAATATGATCAAAGGGTTGACTGCAGATGAAAATGTGACAGTTCATGATACTTCTTCATTTAGTGCAGTAACTTTAAGATACTGTGGGTACACAGCAAACATCAGGGTTGTCGGGGATGTGAGGAAGAAGAACTTGGAGCACCATGTCCTTGATATTGATGATCAGCCTGATGGAGGAGCTAATGCCCTTAACATTTACAGCTTAAGGTATCTATTACACAAGACACATAATGCTGAACCATCTGGAGAGAACACGTCTCCCTTGTCATCAAATATTGATGATATAGAAAGTTCTAGACGCCAAGTTCTAATAATACTTAACGATAGCTTGACTAAGTTGGAGGAGGAGAACCCTGTGGAGGCTGAAGTGGGAATCAGATGGGAACTCGCTTCCTGTTGGATACAGCATTTGCAGAAGCAGGATGGTACCGAAAAAAGTCCCAATGGAATCCAAAGTGAGACTAGTAGTGAAATATCTGTCAAAGGTTTGGGAAAGCAATTTAAGTTGCTCAAAAAGAGAGACAAGAAATTGGATGGAAAGGAGGAGAGTGATCCTCAAGTTTCTGGTCATGAGTCGAGTCCAAGTATAGGCACTGAAGCTGCTGAAGTGACTGCTGAGGCTGAGTTGGAAAAGATGGTTTCTGAAGAAGCTTTCTCACGCCTGAAGGAAACTGGAACTGGCCTTCATCTTAAGACAATGAATGAGCTTATCACAATGGTGCAAAGCTATTATGATGAAGTTGCTGTACCAAAGCTGGTAACAGATTTTTCATCTCTGGAACTCTCTCCTGTTGATGGACGCACCCTTACTGATTTCATGCATCTGAGGGGACTGAAGATGCGTTCTTTGGGACGTGTGGTTGAGTTAGCTGAGAAGCTTCCGCACATACAATCCCTATGTGTCCACGAGATGGTCACCAGAGCTTTCAAGTATGTAGTCAAGGCTGCCATTGCTGCTGTTAATGATGTTTCACAAATACCAGCTGCAATAGCATCATCCTTAAATATCCTATTCGGGAAAGATGCTGAGAACTTCTGTGAAGACTATCAACTGAAACTGAGGTGGTTAAGATCATTCCTTGAGAAAAGGTTCGGGTGGACGCTCAATGATGAGTTTCTTCACTTAAGAAAGTTGTCAATTCTTCGTGGGCTCTGCCACAAGGTCGGTTTTGAGTTGGTTCCAAGAGATTATGATATGGACGGTCCAAATCCTTTTAGGAAAGATGATGTTATTAGCATGGTACCTGTTTGTAAGCATGTAGTTTCATCTTCAGCAGACGGTAGGAATCTGTTGGAGTCTTCTAAGGTAGCACTGGACAAGGGAAAGCTGGAAGATGCTGTTAATTATGGAACAAAAGCTTTGGCAAAGATCATAGCTGTCTGTGGTCCCTATCACCGAACAACTGCTGGTGCTTATAGTCTTCTTGCTGTAGTCCTATACCATACTGGAGATTTTAATCAGGCTACTATATATCAGCAGAAGGCGTTGGATATCAATGAAAGGGAACTTGGGCCTGATCATCCAGATACAATGAAGAGTTATGGGGATCTTTCAGTATTTTACTATCGTCTCCAGCACATTGAACTGGCACTGAAGTATGTCAATCGTGCTTTGTTTCTGCTTCACTTCACGTGTGGGTTGTCTCATCCAAACAGCGCTGCAACTTATATTAATGTTGCCATGATGGAAGAAGGAATGGGAAATGTAAACCTTGCTCTTCGGTATCTTCATGAAGCCTTGAAATGCAACAAGAGGCTGTTAGGACCAGATCATATACAGACCGCTGCAAGCTATCATGCAATCGCCATTGCACTCTCACTTATGGAGGCCTATTCCCTCAGTGTTCAACATGAGCAAACCACCCTCAGAATTCTTCAAGCAAAGCTTGGACCAGAGGATCTACGTACTCAGGATGCAGCAGCGTGGCTAGAGTATTTTGAATCTAAGGTTATCGAGCAGCAAGAATTGGCACGAACAGGAACACCCAAGCCAGATGCATCTATTGCGAGCAAAGGACATCTTAGTGTATCAGATCTTCTGGACTTTATTAGTCCTGATCATGATCCGAAGGGTGGAGAAGCTCAGAAGAAACACAGGCGTTCGAAGATATCGCAGTTTGCTGAAAGCTCACCAGGTGGACTAGAGCTGGAGCAGGTGGCTAATGGCCCGAAAGTTGAAGATGCCATTTCACAAACAGTGGTCCCGGAAGAAAAACCTGCTAATAATCTAAAAACAAGATTGATCCTTGAAGATCCGAAAGACAATGTGATTATTCTGAATGATCAGCCTATGATTGGAGAAGTTACTGATGTGAGTTCAGATGAGGGGTGGCAAGAAGCGGATTCTAAAGTGCGCTCTGCAAATGCTAATGACCACAAGTTTAATAAAAGAAGGCCTAATCATCTTAAGGTAAAAGTCAAACGTTCTAGCCTCTCTAGTGCTAGAGAAAATGGCCAAATGACAGGATCCTTCCCTAGAGAGCAAAAGGTGAACCTTAAGGTGAGCTCAAAGGACTCTTCTCCGCCAAAGAATCCAAGACCGCAAAGCTCATATACTGTAGGTGACATGGCCATTGTTCAAAACAAGAGGGTTTCCTCGGTTCCAGCAACACTTACAGCAATGGCTTCAAAATCCTTTTCCTACAAAGAAGTGGCCATGTCACCACCAGGCACTATTCTCAAGCCGGTTCCCCATAAAGAAGCGTCAAACAAAGGAGAAGATCAAAACCAGATGAATAATGTTCCTGAGTCTTCAGAAGGCGAAGAATGTAAGAGTGCTAATATGGAAGTGAACTCGGGTAATGAAGATCAAGTTGGCAAGGTTTCTGATTCAAACCCAAGTCTTCAAGTGGAAAATCCAGTCCCTGAAAATGGAGAAACGCTATGTTTGGATAGTCAAGAAAAGCCCACGGAACCAAAAGGTTCCAAGCTCTCAGCCGCAGCTCCACCATTCAATCCTGCGTCTCTTTTTCAGCCTTTAAACATGGTCGGACCGACAAATTTTTATGAGGTAAGAGCAAGCCAAGGCATGCTGTTGGAGCCAGTTGATCAGTTCCCTCCAATTTCGGCTAGAGTCCCATGCGGACCAAGGTCACCCTTATTTAATTATAGAGCCAACCATTCTACTCATGTTAAACATGCTGTGAAAGTCATGAACCCTGATGCCCCTGAATTCGTGCCCAGGAAAGCTTGGCAAGCTGATCTAGGCGACACTGTTTCAAAACCGTCTTATGATTCAAATTCCTCCATTGATGTGACAAAGGATGGAAAAGAAGGCGATGACAAACCAAGTAACGATGGGCTCAAAGAGGACAGGTCGAAGAAGAATACTTCGGAGGCTGAGAAGGCAGAGCTAGCAAGGCAGATACTTCTCAGCTTCATTGTGAAGTCTGTGCAGAATAGTTCAGATCATAACTCGTATGAGTCCAACAGAAGTACTGGAAAAAAATCCGGGCATTGGGAAACTTCTTCAGAAGCTATTGCAAATGACAGTGCAATAATCAAAATACTTCATGGGAATGAAGATGGGGTTGCCAAATCAAATGATCAAGAGACGGTGAATACTAAGTATGCCAATAAAGCCAGGGACGGGGAAGGATTCGTTATCGTCTCCAAGAGGAGGAGAAACCGGCAGCCTATTGCTAATAATGTTGGGAATCTGTACAATCAACAATCCATTTGCACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117211.p1 GENE.R_Transcript_117211~~R_Transcript_117211.p1 ORF type:complete len:1670 (+),score=341.81,TPR_12|PF13424.2|1.1e-08,TPR_12|PF13424.2|1e-14,TPR_12|PF13424.2|1.2e-10,eIF3_p135|PF12807.3|5.5e-21,TPR_10|PF13374.2|8.4,TPR_10|PF13374.2|1e-09,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|1.1e-06,TPR_10|PF13374.2|2.2,TPR_10|PF13374.2|2.7e+03,CLU_N|PF15044.2|7.3e-17,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|0.0024,TPR_2|PF07719.13|1.8e+02,TPR_2|PF07719.13|0.015,TPR_2|PF07719.13|10,TPR_2|PF07719.13|5.4 R_Transcript_117211:263-5272(+)
MAPKSGRSKNHKNKSDKKKKEEKVVPSVIDITVTTPYDSQVTLKGISTDKILDIRRLIASNVETCHITNYSLSHEVRGHKLSDRVEITSLKPCVLTMFEEEYDKEAQAMAHVRRLLDIVACTTWFSKPKGQRPTSAYSRSKKSKSQSPINGGPQSASRELGIKNGPSVSIISGENDMEALHPTPKISEFYDFFSFSHLTPPVLCIKRCERKAEEKRDGDYFELQIKICNGKIVQVVASTKGFYTLGKQSIQSHSLVDLLHQLSQAFANAYDSLIKAFVDHNKFGNLPYGFRANCWLTPPSVAESPSRYPPLPIEDENWGGNGGGQGRDGEHDLRPWATEFAILASLPCKTEEERLIRDRKAFLLHSIFVDVSIFKAVNTIRQLITSHANSRDCLPGSVVHESRVGDLSIVVKRDADDANVKPTDKLTCEPSEVPAREIVRRNMIKGLTADENVTVHDTSSFSAVTLRYCGYTANIRVVGDVRKKNLEHHVLDIDDQPDGGANALNIYSLRYLLHKTHNAEPSGENTSPLSSNIDDIESSRRQVLIILNDSLTKLEEENPVEAEVGIRWELASCWIQHLQKQDGTEKSPNGIQSETSSEISVKGLGKQFKLLKKRDKKLDGKEESDPQVSGHESSPSIGTEAAEVTAEAELEKMVSEEAFSRLKETGTGLHLKTMNELITMVQSYYDEVAVPKLVTDFSSLELSPVDGRTLTDFMHLRGLKMRSLGRVVELAEKLPHIQSLCVHEMVTRAFKYVVKAAIAAVNDVSQIPAAIASSLNILFGKDAENFCEDYQLKLRWLRSFLEKRFGWTLNDEFLHLRKLSILRGLCHKVGFELVPRDYDMDGPNPFRKDDVISMVPVCKHVVSSSADGRNLLESSKVALDKGKLEDAVNYGTKALAKIIAVCGPYHRTTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGPDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNSAATYINVAMMEEGMGNVNLALRYLHEALKCNKRLLGPDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLRILQAKLGPEDLRTQDAAAWLEYFESKVIEQQELARTGTPKPDASIASKGHLSVSDLLDFISPDHDPKGGEAQKKHRRSKISQFAESSPGGLELEQVANGPKVEDAISQTVVPEEKPANNLKTRLILEDPKDNVIILNDQPMIGEVTDVSSDEGWQEADSKVRSANANDHKFNKRRPNHLKVKVKRSSLSSARENGQMTGSFPREQKVNLKVSSKDSSPPKNPRPQSSYTVGDMAIVQNKRVSSVPATLTAMASKSFSYKEVAMSPPGTILKPVPHKEASNKGEDQNQMNNVPESSEGEECKSANMEVNSGNEDQVGKVSDSNPSLQVENPVPENGETLCLDSQEKPTEPKGSKLSAAAPPFNPASLFQPLNMVGPTNFYEVRASQGMLLEPVDQFPPISARVPCGPRSPLFNYRANHSTHVKHAVKVMNPDAPEFVPRKAWQADLGDTVSKPSYDSNSSIDVTKDGKEGDDKPSNDGLKEDRSKKNTSEAEKAELARQILLSFIVKSVQNSSDHNSYESNRSTGKKSGHWETSSEAIANDSAIIKILHGNEDGVAKSNDQETVNTKYANKARDGEGFVIVSKRRRNRQPIANNVGNLYNQQSICT*

Click here to download the sequence:
Link to NCBI Protein BLAST