Transcript Information: R_Transcript_117233.p1


Annotated TAIR IDAT5G12920.2
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4077917-4082585 | Reverse length=572
E-Value1.1E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4693464066081
Replicate 23.1105630246367
Replicate 33.1107915254034
Condition 2: 8 Hour
Replicate 12.670269222642
Replicate 22.6685826065612
Replicate 33.5481543393761
Condition 3: 24 Hour
Replicate 14.487637215292
Replicate 24.0843072019588
Replicate 34.2334243633094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117233.p1 GENE.R_Transcript_117233~~R_Transcript_117233.p1 ORF type:complete len:486 (+),score=74.24 R_Transcript_117233:488-1945(+)
ATGGATCGATATCTAGTGCCAGTTGAAGTTGAGACATCTACCACAAACCCTAAGCCAAAACGATGGCCTCGCATGAAGAGAGCTTCTGTAGAATTGAATGGCCGAATTGAATCGAAATACCGTCGTCAAATGTCTAGCTTGTTAATTCACTCTTATTCTGAGATTGGGGTGTTTCCTCACCTGTATAACATTGATGGGAACGCATGTCCAACCCATATGAACCGCGTAATGGCATTTGCAAACTTGGATTATGAGGGGCCATTTAGAAGTCTCAGACATGGAATATCGGCATTGGAGTTTGATAATCAGGGAATATACTTAGCATCAGTGACCAAATCCGGGTGCTTGATGGTGCATGATTTTGAATCTCTTTACTGCCTTACGGATACAGCATTACAATGGTCAAGGGAGGATGAATCGAAGCATCTTTTGCACATTTCTACACATAGACAACTTGATGCTGTCCGATGGAATCCTGCTAACCAAGATGAGATTGCTTGCACATCAATGAAGAGCAGTGAGATATTTGTTTTTGACGTTGCTTATATCTCTTCAGATCCTGTTGAAGTGCTAAGGAAGCGGCCAGTTGTCACAATCCATGGTTCTGATATCCACAAGGGTCTGCCAGATATTGCTTTTACATCGTCTGATGCTTCCAGAATTTTCGCATGTGACACCTATGGGTCAATCAATATATGGGATAGAAGAGCAAGTGTTTTTCCATCCATGGAGCTAACAACCAACTCCCACAATACACTCAACAGCATACAATTGAATGTTGAAAATCAGATTGTTTTCGGAGCGGGTAAGCAGGGCATCATATACATGTGGGATCTTCGTGGTGGAAGAACATCTGCTGCTTTTCAGAGCCATAAAGAGGCATTTCACCCACCTATTACATCTGTTAAAGTATCGTCACTGTTGGAGAAAATCCAGTCGCTAAAGGCACAATCAGCCATTGTTAACGAGGATATACACTCGATCAACTTGGATCCTTCATGTGCACATCGGTTGGCATTTCACCTTGATGATGGCTGGTCTGGGCTTCTTGACATGCATGAATTAGAAGTGTCTCATATCCACTGCCCACCACCTGCTTGGTTGACCGGCTCAAATATTTCTTCAACCTACGTGAGAAAACCATCCTGGCTTCCCACCAATTCAATCTATGCAGCCGGGTCATCATCAGATAAAGGACTTTATCTTTTGGACTTCTATCCTGATGCAACTTCGCCTTGTCATGTAGAGTTCAGTGAGGATAATGTTTCTTGGCAAAATGGGTTTGTTCCTCTATCTGAAGATGTTACTGCATGTGCTGCTCATCCACTTAATGGCTCCATTATAGCTGGTACCGAGCACGCATCACTGCTATTGATTAGCCAGCAGAGGAAGTCATGGCAAGGGGATGAAAGTCCTAGAAATAACGAAAAGCTGCAAGAAGACAAAGAAAATTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117233.p1 GENE.R_Transcript_117233~~R_Transcript_117233.p1 ORF type:complete len:486 (+),score=74.24 R_Transcript_117233:488-1945(+)
MDRYLVPVEVETSTTNPKPKRWPRMKRASVELNGRIESKYRRQMSSLLIHSYSEIGVFPHLYNIDGNACPTHMNRVMAFANLDYEGPFRSLRHGISALEFDNQGIYLASVTKSGCLMVHDFESLYCLTDTALQWSREDESKHLLHISTHRQLDAVRWNPANQDEIACTSMKSSEIFVFDVAYISSDPVEVLRKRPVVTIHGSDIHKGLPDIAFTSSDASRIFACDTYGSINIWDRRASVFPSMELTTNSHNTLNSIQLNVENQIVFGAGKQGIIYMWDLRGGRTSAAFQSHKEAFHPPITSVKVSSLLEKIQSLKAQSAIVNEDIHSINLDPSCAHRLAFHLDDGWSGLLDMHELEVSHIHCPPPAWLTGSNISSTYVRKPSWLPTNSIYAAGSSSDKGLYLLDFYPDATSPCHVEFSEDNVSWQNGFVPLSEDVTACAAHPLNGSIIAGTEHASLLLISQQRKSWQGDESPRNNEKLQEDKENS*

Click here to download the sequence:
Link to NCBI Protein BLAST