Transcript Information: R_Transcript_117248.p1


Annotated TAIR IDAT3G56360.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20896641-20897342 | Forward length=233
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 20
Replicate 31.4139961479106
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 20.27606026964427
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117248.p1 GENE.R_Transcript_117248~~R_Transcript_117248.p1 ORF type:internal len:81 (-),score=27.80 R_Transcript_117248:1-240(-)
CTAAGAATGAATATTCATCAGGTTAAGGCTGCTGTGAATGGCGATATTATAAGAGATGGTGCTGATGATCATAATAGGAAGAAAATTGTTGCACAACAACTTGATCATTGGTTGCATAATTCTGTTGCTGAGATTGTAAAGAACATTGGTGAAGCACCTTTTCTAGTGCATATCTACACAGACAACAATGGGCTTGGATCTTCACCATCATCACCACCACCACCATCATCATATTCTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117248.p1 GENE.R_Transcript_117248~~R_Transcript_117248.p1 ORF type:internal len:81 (-),score=27.80 R_Transcript_117248:1-240(-)
LRMNIHQVKAAVNGDIIRDGADDHNRKKIVAQQLDHWLHNSVAEIVKNIGEAPFLVHIYTDNNGLGSSPSSPPPPSSYSA

Click here to download the sequence:
Link to NCBI Protein BLAST