Transcript Information: R_Transcript_117266.p1


Annotated TAIR IDAT5G47380.1
Annotated Gene NameProtein of unknown function, DUF547
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19221472-19224471 | Reverse length=618
E-Value1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.807861112841
Replicate 25.9016628197162
Replicate 36.9339313804569
Condition 2: 8 Hour
Replicate 13.4412566952885
Replicate 26.0434815786988
Replicate 33.4340884957489
Condition 3: 24 Hour
Replicate 15.460235232535
Replicate 25.6032279343629
Replicate 33.9042932684736


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117266.p1 GENE.R_Transcript_117266~~R_Transcript_117266.p1 ORF type:5prime_partial len:185 (+),score=29.67,DUF547|PF04784.10|2.7e-14,DUF547|PF04784.10|3.7e+03 R_Transcript_117266:3-557(+)
GCTGCCTACAACATTGGGGGCCTTATCATTAGTGCAAATGCCATTGAACACGCTGTATTCTGCTTCCATACACCTCGAATTGGAGGGTGGCTTGAAACCTTCCTATCAACAACCTTTCGGAAGAAATCTGGGGAAGAGAGGGAACTCATTAATTCAAGACTTGGGCTTCCTAACTCGCAGTCCCTTGTTTGCTTTGCACTTTGCACTGGAGCCTTTTCTGATCCTGTGCTTCAGGTTTACACAGCATCAAACATAAAAATTGAGCTAGAACAAGCAAAGAAAGAGTTTCTTCATGCCAACGTAGTCATCAAGAAATCAAAGGTGTTCCTACCAAGGCTGCTTGAAAGGTTCGCAAGAGAGGCCTCAATGGGGTCGTACGACCTTCTCAAGTGGGTTTCTGAGAATGTCGATCGAAAGCTTAGCAATGCGATCCAGCAATGCCTTAATTGTAAGAACAGCAAGAAAGCTTCTCAAATCATCGAGTGGTTACCTTACAGCTCAAAGTTCAGATACATGTTCCCTCTAGAACTAGCAAAAAAGCCATGGTGGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117266.p1 GENE.R_Transcript_117266~~R_Transcript_117266.p1 ORF type:5prime_partial len:185 (+),score=29.67,DUF547|PF04784.10|2.7e-14,DUF547|PF04784.10|3.7e+03 R_Transcript_117266:3-557(+)
AAYNIGGLIISANAIEHAVFCFHTPRIGGWLETFLSTTFRKKSGEERELINSRLGLPNSQSLVCFALCTGAFSDPVLQVYTASNIKIELEQAKKEFLHANVVIKKSKVFLPRLLERFAREASMGSYDLLKWVSENVDRKLSNAIQQCLNCKNSKKASQIIEWLPYSSKFRYMFPLELAKKPWWV*

Click here to download the sequence:
Link to NCBI Protein BLAST