Transcript Information: R_Transcript_117273.p1


Annotated TAIR IDAT5G47380.1
Annotated Gene NameProtein of unknown function, DUF547
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19221472-19224471 | Reverse length=618
E-Value1E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0250119028354
Replicate 22.3149767125662
Replicate 33.9352600485698
Condition 2: 8 Hour
Replicate 12.009096611056
Replicate 23.0961221010872
Replicate 32.0478740187103
Condition 3: 24 Hour
Replicate 13.2965056532088
Replicate 22.4882856184241
Replicate 33.0306052643396


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117273.p1 GENE.R_Transcript_117273~~R_Transcript_117273.p1 ORF type:3prime_partial len:390 (+),score=83.68,DUF547|PF04784.10|4.9e+03,DUF547|PF04784.10|5.9e-26,Lzipper-MIP1|PF14389.2|1.5e-13 R_Transcript_117273:552-1718(+)
ATGCGGATTATGCTTGAGAAAGCGATTGGCAGAGCTTCGAGTACTTTGTCTCCAGGTCACAGGCATGTTTCTTCACAGACAAAGGAGCTGATTGCTGAGATTGAGCTACTTGAACAAGAGGTTGCCAATAGGGAGCAGCATGTTCTTACTCTCTACAGGAGCATATTTGAACAGTGTGTTAGTCGGGCACCTTCTGAGCAAGGCTCAGAAATCAGTTCTCCTGCTCATACAAGAAACAAGACAAGGAAACATCCAAGTATAATTTCTAGTGCATTTTGTTCCTCGAAGAAGTTCCCTTTACGAGTTCTTTCTTCAAGGATCAGTTCTGGGAAAAAAGACGGCAAGACTAGGCTTGCCTCATCATGCATGGGGAAAATTGACATACACTATGAGAGATCTTGTTCCAGCTTGAGTAAGGGACATGCAAAGTCACCCACCAGAGAGAAAACTCCTGTTTTGCGAACTTTAAAGGATCATCTCCATCAGTGTCCCAGCAAGCTCTCTGAAGAAATGGTTAAATGCATGGCTGCAGTGTACAGCTGGCTCTACAAGGCAGAAAGATCAGGGAATAAGCAGTCATCTGCGCTCTCAGAGTCAAAGTCATATGCTAATCTTGTACGCCAGCTTCCTGGTGCAGACTACCATACTTCCAAGCCCATGGTAGAGATATGCTTGATGCCAGCTGACAAAAGCCAGTTTGCTCATGCCTCTTATGCAATTAACAGCTACAGAACTCTTGTTGAACAACTGGAAAGGGTCAATGTGAGTCAAATGGAAGCCAAAGCCCAGATTGCTTTTTGGATCAACATCTACAACTCTCTGATAATGCATGCATATTTAGCATATGGCATCCCCCATAGCTCTCTAAGGAGATTAGCTCTTTTTCACAAGGCTGCCTACAACATTGGGGGCCTTATCATTAGTGCAAATGCCATTGAACACGCTGTATTCTGCTTCCATACACCTCGAATTGGAGGGTGGCTTGAAACCTTCCTATCAACAACCTTTCGGAAGAAATCTGGGGAAGAGAGGGAACTCATTAATTCAAGACTTGGGCTTCCTAACTCGCAGTCCCTTGTTTGCTTTGCACTTTGCACTGGAGCCTTTTCTGATCCTATGCTTCAGGTTTACACAGCATTAAATATAAAAATTGAGCTAGAACAAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117273.p1 GENE.R_Transcript_117273~~R_Transcript_117273.p1 ORF type:3prime_partial len:390 (+),score=83.68,DUF547|PF04784.10|4.9e+03,DUF547|PF04784.10|5.9e-26,Lzipper-MIP1|PF14389.2|1.5e-13 R_Transcript_117273:552-1718(+)
MRIMLEKAIGRASSTLSPGHRHVSSQTKELIAEIELLEQEVANREQHVLTLYRSIFEQCVSRAPSEQGSEISSPAHTRNKTRKHPSIISSAFCSSKKFPLRVLSSRISSGKKDGKTRLASSCMGKIDIHYERSCSSLSKGHAKSPTREKTPVLRTLKDHLHQCPSKLSEEMVKCMAAVYSWLYKAERSGNKQSSALSESKSYANLVRQLPGADYHTSKPMVEICLMPADKSQFAHASYAINSYRTLVEQLERVNVSQMEAKAQIAFWINIYNSLIMHAYLAYGIPHSSLRRLALFHKAAYNIGGLIISANAIEHAVFCFHTPRIGGWLETFLSTTFRKKSGEERELINSRLGLPNSQSLVCFALCTGAFSDPMLQVYTALNIKIELEQA

Click here to download the sequence:
Link to NCBI Protein BLAST