Transcript Information: R_Transcript_117287.p2


Annotated TAIR IDAT1G72500.1
Annotated Gene NameLOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27295336-27298556 | Reverse length=756
E-Value6E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94006665861212
Replicate 20.63079014126217
Replicate 31.3763704993396
Condition 2: 8 Hour
Replicate 11.8916118843365
Replicate 21.0556639495839
Replicate 31.0906547153881
Condition 3: 24 Hour
Replicate 11.9706272298459
Replicate 20.37863105391549
Replicate 30.46969323362441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117287.p2 GENE.R_Transcript_117287~~R_Transcript_117287.p2 ORF type:3prime_partial len:233 (+),score=25.52 R_Transcript_117287:1979-2674(+)
ATGTTCCTGTTTAATGTCAGAGCAAGGCCTTGTAAAGTAGATGTAAATAATGTACCATTCTATAATGTCATTGGATGCTATACCTCTGTATATATTCTAGTGTGCATTTCTTCAATATTAGGCATGTTAATATTTCCAATTTTGCTCTTATTTTCTCACTTCTTTCCTTTACAGGCACTAGAGTTGGTGTCAAACCAAAGCTACTTAATGACTTTTATTTTTCTCATAACTGATGGTGCTGTTGAAAATGAAAGAGATATTTGTAAGATTGTTGAAGAACGTTGCACTAGAAAAGCTGGATCACCTTCTCTTCGTATTTCTACCTTTGGCATAGGTTCATATTGTAATCACTACTTCCTGCGACTGCTAGCACAGATTGGGAGGGGCTATTATGATGTTGCTTATGAAGCAGATTCTGTTACCTCTCGACTGCAGATGCTGTGCACAATGTCTTCGTCAGTTGTTCTTTCAAATATTGAAGTGGACTGCTTCAATCATGTTAAATCACTTACGTTATATCCATCTACTATTCAAGATCTTTCAAGTGGATGTCCAGTGATTGTGTCAGGAAGATGTCAAGGGAAGTTACCAGAGACTGTGACATTATGTGGCATCTTGGCAGACATGAGTAAATTTACAACAGACCTGAAAATACAGAAGGCAAAAGACATACCTCTAGACAAGGTATTTGCACGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117287.p2 GENE.R_Transcript_117287~~R_Transcript_117287.p2 ORF type:3prime_partial len:233 (+),score=25.52 R_Transcript_117287:1979-2674(+)
MFLFNVRARPCKVDVNNVPFYNVIGCYTSVYILVCISSILGMLIFPILLLFSHFFPLQALELVSNQSYLMTFIFLITDGAVENERDICKIVEERCTRKAGSPSLRISTFGIGSYCNHYFLRLLAQIGRGYYDVAYEADSVTSRLQMLCTMSSSVVLSNIEVDCFNHVKSLTLYPSTIQDLSSGCPVIVSGRCQGKLPETVTLCGILADMSKFTTDLKIQKAKDIPLDKVFAR

Click here to download the sequence:
Link to NCBI Protein BLAST