Transcript Information: R_Transcript_117362.p1


Annotated TAIR IDAT5G02030.1
Annotated Gene NamePOX (plant homeobox) family protein
Annotated Gene Symbol(s)LSN, PNY, HB-6, BLR, RPL, BLH9, VAN
Annotation TypeOrtholog
Chromosome Positionchr5:395754-398872 | Forward length=575
E-Value9.2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7240844015095
Replicate 20.34704628787269
Replicate 30.22717425715192
Condition 2: 8 Hour
Replicate 10.6070875606755
Replicate 21.0348837876912
Replicate 31.440127784758
Condition 3: 24 Hour
Replicate 10.6830421985102
Replicate 20.21872984023713
Replicate 30.61502641268968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117362.p1 GENE.R_Transcript_117362~~R_Transcript_117362.p1 ORF type:complete len:605 (+),score=82.51,POX|PF07526.7|1.8e-33,Homeobox_KN|PF05920.7|1.5e-18,Homeobox|PF00046.25|2.1e-07 R_Transcript_117362:120-1934(+)
ATGGAAATGAGCAATTTTCTACCGGAGCTACACGTGGCGCAGCAAAGCCGGCGAGAGAAGCTGAGAGTTCCGTCAACGTCCACGTCAACACCACCACAACAGCAACCACATGAGCATTTCGACGACGATCTCCTACCGCCACCTGGTGGACCCCCGTTAGCTTTACCCTTGGACACAATGATGAATTACGACGCTACCCCTGCCACCACCACTACCACCATCCACCATCCGGCCCGCTTTGCGGTCCCCACTAGCTGCGAAAACTGGGCCATACCTTGCTACGTCGACTATGAAAACGATCAAGATCAAAGGAGGATGTTTCCACAAGGGATTTTCAATAATAATAACGAGTTGCCGTTATTACCCTCCTTTGTTGGGGGTAATAACGAGACTAGTACCCCTCAGGCCGGCAGCCTCTCTCTTACGTTGTCGTCAAACCAAATCCGTCAACCCGAACCCGGTACCATATCGTCGGTGGTGGACCAGATGGTCAGTAGGATCAGAGGAGGAGGAGGGGGTGGAAATCAGCAGGCCCAAGATACAGCCCATTTGTATAGGAATGTTGGGCCTCTTGGGCCTTTCACTGGGTACACTACCATCTTGAGGAACTCCAAGTTCTTGAAGCCAGCTCAGCTTCTTTTGGAGGAGTTTCTAAATGCGGCTGGTTTGAGGATCAATATCATGAAAGAGTGTGAGGTGGAAGCTGAGAGCAATAACATCAACAATGGCGGCTCCAAATCTCGGTGCTCCGTTACTAATGATCAGTTGAGTAGTGGTGGGAGTGGTTCATGTGAGTCGTACAAGCCCGACTGTCATGAAAAGAAAGCTAAGCTTCTTCACATGCAAGAAGAGGTTTGCAAAAGGCACAAGCAGTATCATCAACAAATGCAAATGGTGATGTCAGCTTTTGAATCAGTCCCAGGACTTGGGAATGCGACTCCCTATATTTCTCGGTCAGTTAAGATCATATCCAGGCCTTTTAGATGTATCAAGAACGCAATTGCTGATCAACTCAAGCACATAAAGAAAGCTTTAGGCGAGGACCTTTCGTCTTCTATCCAGGCACTAAAGGGTGAAAGCACGAGTTTGAGGTTTGATCGGAGTTTCTCTACTAAAGTCAAAGCTAGCAGTGGTGGAATGGGCTATGGTCATCAAAACCATATCTGGAGACCTCAAAGAGGCTTGCCAGAGCGTGCCGTTTCTATCCTTAGAGCTTGGCTGTTTGATCATTTTCTTCATCCGTATCCAACTGACACAGATAAACAAATGCTAGCTACTCAAACAGGCTTATCTCGAAACCAGGTGTCTAATTGGTTCATTAATGCACGAGTGCGTTTATGGAAGCCTATGGTAGAAGAAATACACATGCTTGAAACCAAGGGTGCTGTGGCACGCTCTGATTCCAATTTGGAAAACGCTGGAATGTCCATGGTGGTGAGCAACAGGTACGGAGCTGGCAACCAACCTGCAGGTTGCAAGCAAGCTGTGAACGTGATGTTTGATAAGCGGTTTGAGTACTTGGGGGGATCATCGAGTTCCTTGGATGCATCTAGAGGAGAGACGAGCTCTGAACAAATCTTTCAAAAGCGTTCAAGGTTGGAATCTCATCAAATCCCGAACAGCATGGATGGTTCTTTAATTGGTTTTTTACCTTACCAAAGACGTGGACTCGAGATTGGAGGGATTGGTGCCGTGTCGCTTACCTTGGGCCTTAGGCATGGTTCTGAGACTAGTCAGCAGCAGCTACAGCATCATCAATTCCCACAGCAAGGCTTGCATTTTGGAAGTCATGTCATCCATGATTTTTCAGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117362.p1 GENE.R_Transcript_117362~~R_Transcript_117362.p1 ORF type:complete len:605 (+),score=82.51,POX|PF07526.7|1.8e-33,Homeobox_KN|PF05920.7|1.5e-18,Homeobox|PF00046.25|2.1e-07 R_Transcript_117362:120-1934(+)
MEMSNFLPELHVAQQSRREKLRVPSTSTSTPPQQQPHEHFDDDLLPPPGGPPLALPLDTMMNYDATPATTTTTIHHPARFAVPTSCENWAIPCYVDYENDQDQRRMFPQGIFNNNNELPLLPSFVGGNNETSTPQAGSLSLTLSSNQIRQPEPGTISSVVDQMVSRIRGGGGGGNQQAQDTAHLYRNVGPLGPFTGYTTILRNSKFLKPAQLLLEEFLNAAGLRINIMKECEVEAESNNINNGGSKSRCSVTNDQLSSGGSGSCESYKPDCHEKKAKLLHMQEEVCKRHKQYHQQMQMVMSAFESVPGLGNATPYISRSVKIISRPFRCIKNAIADQLKHIKKALGEDLSSSIQALKGESTSLRFDRSFSTKVKASSGGMGYGHQNHIWRPQRGLPERAVSILRAWLFDHFLHPYPTDTDKQMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHMLETKGAVARSDSNLENAGMSMVVSNRYGAGNQPAGCKQAVNVMFDKRFEYLGGSSSSLDASRGETSSEQIFQKRSRLESHQIPNSMDGSLIGFLPYQRRGLEIGGIGAVSLTLGLRHGSETSQQQLQHHQFPQQGLHFGSHVIHDFSG*

Click here to download the sequence:
Link to NCBI Protein BLAST