Transcript Information: R_Transcript_117365.p1


Annotated TAIR IDAT4G32980.1
Annotated Gene Namehomeobox gene 1
Annotated Gene Symbol(s)ATH1
Annotation TypeOrtholog
Chromosome Positionchr4:15914865-15916873 | Reverse length=473
E-Value5.9E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4452491078516
Replicate 20.061572728493543
Replicate 30.80610220279715
Condition 2: 8 Hour
Replicate 11.2925090001478
Replicate 21.3114886710373
Replicate 31.5436853606781
Condition 3: 24 Hour
Replicate 12.2217232801004
Replicate 20.84081632134166
Replicate 32.8884067768633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117365.p1 GENE.R_Transcript_117365~~R_Transcript_117365.p1 ORF type:complete len:341 (+),score=46.10,Homeobox_KN|PF05920.7|7.2e-19,POX|PF07526.7|1e-17,Homeobox|PF00046.25|3.1e+03,Homeobox|PF00046.25|9.6e-08 R_Transcript_117365:230-1252(+)
ATGTGGTTGGCTTGCAACTTTGCATCATTGATCTTTCTTTTTCTCGTGAAATTTTGCAAGGTTTGCAAAAGGCACAAGCAGTATCATCAACAAATGCAAATGGTGATGTCAGCTTTTGAATCAGTCCCAGGACTTGGGAATGCGACTCCCTATATTTCTCGGTCAGTTAAGATCATATCCAGGCATTTTAGATGTATCAAGAATGCAATTGCCGACCAACTCAAGCACATAAGGAAAGCTTTAGGCGAGGACCTTTCGTATTCTATCCAGGCATTAAAGGGTGAAAGTACAAGTTTGAGGTTTGATCAGAGTTTCTCTACCAAAGTCAAAGCTAGCAATGGTGGAATGGGCTATGGTCATCAAAACCATATCTGGAGACCTCAAAGAGGCTTGCCAGAGCGTGCCGTTTCTATCCTTAGAGCTTGGCTGTTTGATCATTTTCTTCATCCGTATCCAACTGACACAGATAAACAAATGCTAGCTACTCAAACAGGCTTATCTCGAAACCAGGTGTCTAATTGGTTCATTAATGCACGAGTGCGTTTATGGAAGCCTATGGTAGAAGAAATACACATGCTTGAAACCAAGGGTGCTGTGGCACGCTCTGATTCCAATTTGGAAAACGCTGGAATGTCCATGGTGGTGAGCAACAGGTACGGAGCTGGCAACCAACCTGCAGGTTGCAAGCAAGCTGTGAACGTGATGTTTGATAAGCGGTTTGAGTACTTGGGGGGATCATCGAGTTCCTTGGATGCATCTAGAGGAGAGACGAGCTCTGAACAAATCTTTCAAAAGCGTTCAAGGTTGGAATCTCATCAAATCCCGAACAGCATGGATGGTTCTTTAATTGGTTTTTTACCTTACCAAAGACGTGGACTCGAGATTGGAGGGATTGGTGCCGTGTCGCTTACCTTGGGCCTTAGGCATGGTTCTGAGACTAGTCAGCAGCAGCTACAGCATCATCAATTCCCACAGCAAGGCTTGCATTTTGGAAGTCATGTCATCCATGATTTTTCAGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117365.p1 GENE.R_Transcript_117365~~R_Transcript_117365.p1 ORF type:complete len:341 (+),score=46.10,Homeobox_KN|PF05920.7|7.2e-19,POX|PF07526.7|1e-17,Homeobox|PF00046.25|3.1e+03,Homeobox|PF00046.25|9.6e-08 R_Transcript_117365:230-1252(+)
MWLACNFASLIFLFLVKFCKVCKRHKQYHQQMQMVMSAFESVPGLGNATPYISRSVKIISRHFRCIKNAIADQLKHIRKALGEDLSYSIQALKGESTSLRFDQSFSTKVKASNGGMGYGHQNHIWRPQRGLPERAVSILRAWLFDHFLHPYPTDTDKQMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHMLETKGAVARSDSNLENAGMSMVVSNRYGAGNQPAGCKQAVNVMFDKRFEYLGGSSSSLDASRGETSSEQIFQKRSRLESHQIPNSMDGSLIGFLPYQRRGLEIGGIGAVSLTLGLRHGSETSQQQLQHHQFPQQGLHFGSHVIHDFSG*

Click here to download the sequence:
Link to NCBI Protein BLAST