Transcript Information: R_Transcript_117379.p1


Annotated TAIR IDAT3G22400.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX5
Annotation TypeOrtholog
Chromosome Positionchr3:7927011-7931167 | Forward length=886
E-Value1.7E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6442445032716
Replicate 24.9695385600705
Replicate 35.150627388484
Condition 2: 8 Hour
Replicate 19.2727535894893
Replicate 26.0863938739322
Replicate 36.7665767401443
Condition 3: 24 Hour
Replicate 14.6187304481772
Replicate 26.3947200333626
Replicate 35.828087046807


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117379.p1 GENE.R_Transcript_117379~~R_Transcript_117379.p1 ORF type:5prime_partial len:169 (+),score=19.89,Lipoxygenase|PF00305.15|5.3e-66 R_Transcript_117379:2-508(+)
GTCAAAACATGCACCACTATTATATGGATCGCGTCTGCCCTCCATGCTGCTGTCAATTTCGGGCAGTACCCTTATGCAGGGTACCTCCCAAACCGGCCTACTGTAAGCCGTCGCTTCATGCCTCAGACAGGCACTGCTGAATATGCTGAACTTGAGTCTAATCCTGAAAAAGCCTTTCTGAAGACAATAACAGCCCAATTCCAAACACTCCTTGGTGTGTCATTGATCGAAATTTTGTCACGTCACTCCACCGACGAGATCTATCTTGGGCAGAGGGATACTCCTGAGTGGACTTCGGATGCAGAACCACTAGCTGCATTCGAGAGATTCAAAGACAGGTTGTTGGATATAGAAAACAAAATCATCGAAAGGAACAATGACAAGAGATGGAAGAACAGACTGGGACCTGTCAACGTGCCATACACCTTACTCTATCCGAACTCATCAGATTTCTCCGGAGTTGGGGGACTCACTGGCAAGGGCATTCCAAACAGTATCTCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117379.p1 GENE.R_Transcript_117379~~R_Transcript_117379.p1 ORF type:5prime_partial len:169 (+),score=19.89,Lipoxygenase|PF00305.15|5.3e-66 R_Transcript_117379:2-508(+)
VKTCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPQTGTAEYAELESNPEKAFLKTITAQFQTLLGVSLIEILSRHSTDEIYLGQRDTPEWTSDAEPLAAFERFKDRLLDIENKIIERNNDKRWKNRLGPVNVPYTLLYPNSSDFSGVGGLTGKGIPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST