Transcript Information: R_Transcript_117389.p1


Annotated TAIR IDAT5G43860.1
Annotated Gene Namechlorophyllase 2
Annotated Gene Symbol(s)ATCLH2, CLH2
Annotation TypeOrtholog
Chromosome Positionchr5:17630492-17632184 | Forward length=318
E-Value1.9E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5350107121833
Replicate 25.7026988785007
Replicate 36.8578813173666
Condition 2: 8 Hour
Replicate 16.1970398940559
Replicate 27.1775670107509
Replicate 35.6023489569096
Condition 3: 24 Hour
Replicate 16.3771686743622
Replicate 24.9692404290498
Replicate 36.0799179685826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117389.p1 GENE.R_Transcript_117389~~R_Transcript_117389.p1 ORF type:complete len:324 (+),score=62.13,Chlorophyllase|PF07224.7|4.7e-109,Chlorophyllase2|PF12740.3|2e-106,Abhydrolase_5|PF12695.3|4.3e-12,Abhydrolase_1|PF00561.16|1.7e+03,Abhydrolase_1|PF00561.16|3.2e-05,Abhydrolase_6|PF12697.3|1.2e-05 R_Transcript_117389:97-1068(+)
ATGTCTTGCTCTTCTCTCTCTGCTAGTATAAAACAAAGCAACTATGGCAGAGTCTTTGAGAGTGGGATCCATCCCACAGTCCTGATTAGCATCAAAAGCGAGGATCTCAGTGATTATGCCAAATCTATTCCTCTTCTAAAGCCACTCTTGATTGGAGCCCCTACTTCTTCTTCTCAAAGTACTGAGTTTCCTGTGTTGTTGTTGCTTCATGGGTATCTTCTATGCAACCTTTTCTACTCTCAACTTATTCAACACATTGCCTCCCATGGATTCATTGTCATTGCTCCTCAGCTATATACCGTCGCGGGCTCAGATTCAAGTGATGAGATCATGGCCACAGCTGCCATCATAAATTGGTTGTCCAAAGGGTTAACCGATGTACTTCCAAGCAATGTCCGACCAAATCTAGAAAAGCTAGCAGTTTCAGGCCACAGTCGTGGAGGAAAGGTAGCATTTGCCTTGGCTTTAAGCAAAGTGGCAAAATCTCCTCAACGTATATCTGCCTTGATTGGCATAGACCCAGTTGATGGAATGGACATAGGAAAACAAACACCTCCTCCTGTGCTGAACTACATTTCCCAATCCTTCCATCTTGATGGATTGCCTGTACTGGTTCTTGGTTCGGGCTTGGGCTCACATAAGAAAAACCCTTGGTTTCCTGCTTGTGCTCCTAAGGGAGTTAACCATGCTGACTTTTATGATGAATGTCAAAGCCCTGCTTGGTATTTTCTTGTTAAGGATTATGGTCATATGGACATGTTAGATGAAGATACCAAGGGGATAAGAGGAAAGGCTACTTACTGCTTGTGCAAGAATGGAAATTCTAGAGAACCTATGAGAAGGTTTACTGGAGGGGTGATAGTTGCCTTTCTAAATGCTTACTTTCATGGTGATTTTAAGGATTTGCTTTTGATCCGAGATGGACATGAAAGTGTACCGGTAGAATTTGAGAAGTTTAACTGTCGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117389.p1 GENE.R_Transcript_117389~~R_Transcript_117389.p1 ORF type:complete len:324 (+),score=62.13,Chlorophyllase|PF07224.7|4.7e-109,Chlorophyllase2|PF12740.3|2e-106,Abhydrolase_5|PF12695.3|4.3e-12,Abhydrolase_1|PF00561.16|1.7e+03,Abhydrolase_1|PF00561.16|3.2e-05,Abhydrolase_6|PF12697.3|1.2e-05 R_Transcript_117389:97-1068(+)
MSCSSLSASIKQSNYGRVFESGIHPTVLISIKSEDLSDYAKSIPLLKPLLIGAPTSSSQSTEFPVLLLLHGYLLCNLFYSQLIQHIASHGFIVIAPQLYTVAGSDSSDEIMATAAIINWLSKGLTDVLPSNVRPNLEKLAVSGHSRGGKVAFALALSKVAKSPQRISALIGIDPVDGMDIGKQTPPPVLNYISQSFHLDGLPVLVLGSGLGSHKKNPWFPACAPKGVNHADFYDECQSPAWYFLVKDYGHMDMLDEDTKGIRGKATYCLCKNGNSREPMRRFTGGVIVAFLNAYFHGDFKDLLLIRDGHESVPVEFEKFNCRT*

Click here to download the sequence:
Link to NCBI Protein BLAST