Transcript Information: R_Transcript_11746.p1


Annotated TAIR IDAT4G29830.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)VIP3
Annotation TypeOrtholog
Chromosome Positionchr4:14597728-14599157 | Forward length=321
E-Value1.7E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.421551637477
Replicate 224.369667242185
Replicate 322.779830462656
Condition 2: 8 Hour
Replicate 122.925823690219
Replicate 224.404951372374
Replicate 326.548616087436
Condition 3: 24 Hour
Replicate 129.762475851982
Replicate 228.164748887967
Replicate 335.772148934264


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11746.p1 GENE.R_Transcript_11746~~R_Transcript_11746.p1 ORF type:5prime_partial len:361 (+),score=54.94,WD40|PF00400.28|0.18,WD40|PF00400.28|0.089,WD40|PF00400.28|0.7,WD40|PF00400.28|0.0012,WD40|PF00400.28|0.0019,WD40|PF00400.28|1.4e-08,WD40|PF00400.28|1.4,eIF2A|PF08662.7|1.2e+03,eIF2A|PF08662.7|1.4,eIF2A|PF08662.7|0.0014,Ge1_WD40|PF16529.1|65,Ge1_WD40|PF16529.1|28,Ge1_WD40|PF16529.1|0.56,Ge1_WD40|PF16529.1|0.13 R_Transcript_11746:3-1085(+)
TTTAGTCAATACAAACAAAGAGCACAAACACTCCAAACGAAGAAAAAAACACTTCACACTAGAGAGACAAGAAAAGAAACACCCCTCCCCAAGTTCAGAGTAATGAAGCTAGCAGGGTTGAAATCCTTAGAATCAGCACACGACGACTCAATATGGGCAGCAACTTGGGTCCCCGCATCCGAGACCCGTCCCCGCCCACTTCTCCTCACCGGCTCACTCGACGAGACTGTACGGCTCTTCAACTGTGGAACCACCGATGACGACGTCGTTTTGGAGCGCACAAATACAGGGCATAGTCTTGGGGTTGTATCAGTGGCTGCTCATCCTTCTGGTGTAATTGCTGCATCTTCTTCACTTGATAGTTTTGTGAGAGTGTTTGATGTGGATACTAATCACACTATTGCCACTCTTGAGGCTCCTCCCTCTGAGTGCTGGCAATTGCAGTTCCACCCTAAGGGTACTATGCTAGCAGTTGCTGGAGGTAGCAGCACATCAGTCAAACTATGGGACACAGCAACATGGCAACTTGTTACCACACTACAAATCCCTCGTCCTGAAAGCAGCAAGCCAAGCGAGAAAATTCCGGCAAAGAAGTTTGTACTCTCAGTCGCGTGGAGTCCTGATGGGAGACGAGTGGCTTGCGGCTCAATGGATGGGACAATTTCTGTCTTCGATGTGGCCCGTGCCAAGTTCCTTCACCATCTTGAGGGTCACCTGATGCCAGTCAGATCTCTTGTGTATTCTCCTATCGATCCTAGAGTTCTATTTTCAGGATCTGACGATGCGCATATACATATGTATGATGCTGAGGGCAAGAGCTTGATAGGGTCCATGTCTGGTCACTCGAGCTGGGTTTTAAGTGTTGATGCAAGCCCAGATGGTTCAGCTATTGCAAGCGGTTCAAGTGACAGGACCGTGAAGCTTTGGGACCTCAGCATGCGGGCAGCCGTCCAGAGCATGACCAACCATGCAGACATGGTATGGGCAGTAGCGTTTCGGCCACCTGGTGGGACCGCTGTGAGAGCTGGTCGGCTTGCTAGCGTATCAGATGACAAGAGCATATCATTATATGATTATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11746.p1 GENE.R_Transcript_11746~~R_Transcript_11746.p1 ORF type:5prime_partial len:361 (+),score=54.94,WD40|PF00400.28|0.18,WD40|PF00400.28|0.089,WD40|PF00400.28|0.7,WD40|PF00400.28|0.0012,WD40|PF00400.28|0.0019,WD40|PF00400.28|1.4e-08,WD40|PF00400.28|1.4,eIF2A|PF08662.7|1.2e+03,eIF2A|PF08662.7|1.4,eIF2A|PF08662.7|0.0014,Ge1_WD40|PF16529.1|65,Ge1_WD40|PF16529.1|28,Ge1_WD40|PF16529.1|0.56,Ge1_WD40|PF16529.1|0.13 R_Transcript_11746:3-1085(+)
FSQYKQRAQTLQTKKKTLHTRETRKETPLPKFRVMKLAGLKSLESAHDDSIWAATWVPASETRPRPLLLTGSLDETVRLFNCGTTDDDVVLERTNTGHSLGVVSVAAHPSGVIAASSSLDSFVRVFDVDTNHTIATLEAPPSECWQLQFHPKGTMLAVAGGSSTSVKLWDTATWQLVTTLQIPRPESSKPSEKIPAKKFVLSVAWSPDGRRVACGSMDGTISVFDVARAKFLHHLEGHLMPVRSLVYSPIDPRVLFSGSDDAHIHMYDAEGKSLIGSMSGHSSWVLSVDASPDGSAIASGSSDRTVKLWDLSMRAAVQSMTNHADMVWAVAFRPPGGTAVRAGRLASVSDDKSISLYDYS*

Click here to download the sequence:
Link to NCBI Protein BLAST