Transcript Information: R_Transcript_117536.p1


Annotated TAIR IDAT3G23740.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8552077-8554730 | Reverse length=566
E-Value2.5E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9033739890726
Replicate 28.5077945924777
Replicate 37.6639642515008
Condition 2: 8 Hour
Replicate 16.3717864174988
Replicate 23.9069198755975
Replicate 38.9071100442048
Condition 3: 24 Hour
Replicate 18.4491558198614
Replicate 29.9207670102597
Replicate 39.7640318305862


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117536.p1 GENE.R_Transcript_117536~~R_Transcript_117536.p1 ORF type:5prime_partial len:269 (+),score=65.35 R_Transcript_117536:1-807(+)
GGTGAACAGGTTTCTTCAGGTAAGGTAGAGAGTTCGGGAAATGTTAGTCCAGTTAAAACTAATGAATCTCCTATAGAAGCTCCACAAGGTGAACAGGTTTTTTCTGGTAATTTAGAGGATTTGGGAAATGTTAGCCCAGTTGTTAAAACTGATCCTGCAGATTTGTCTGATGCCCCTTGTGACAGCCCTGAAGCTCCGGAAAAATTCACCACTTCTGAAGCCCCATGTCTTCTGTCCTTTAATAAGGAAGGGGAGTGTAGTACAGCACTCGTAGAATGTAAAACAGAAGAGAATTTGACAATGGTGATTCACAGTGCCCCCCAAAATGAAGCTGTTGTTTCTTCAAGTATACCCGTTGTTGGTCTTGCTAATGGAATCCTGAAGAGAAATCCCCGAGGATGTAGGGGAATTTGCAATTGCTTGAGCTGTGCTTCTTTCCGTCTCAATGCAGAGAAGGCATTTGAGTTTTCTAGGAACCAGCTACTAGATACTGAAGAACTTGCACTAGACTTGATGAAGGAACTATCAACTCTCCGCTCTATGTTAGAAAAATCTGTCAGTGAAGCCAATGGTCTTGCTACTATTTCTGCTGATCCAGTGCAAGAAGCATGCAGAAGAGCTTCTAATGTGGAAGATATAACAAGAAATCGCTTGAGCCAAATGAAAGAAGACCTTTATGTTCATTGCAGAACCAAGCCATTGCAGCGGCCTAGAGTGAACTTCTCTGGTTCTGTCACCGAAAAGGTTGTAGGTACTCGAAGAAAGCAAATGGGCCGAGATGCCAAGTCGAGGACTGTGAAACACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117536.p1 GENE.R_Transcript_117536~~R_Transcript_117536.p1 ORF type:5prime_partial len:269 (+),score=65.35 R_Transcript_117536:1-807(+)
GEQVSSGKVESSGNVSPVKTNESPIEAPQGEQVFSGNLEDLGNVSPVVKTDPADLSDAPCDSPEAPEKFTTSEAPCLLSFNKEGECSTALVECKTEENLTMVIHSAPQNEAVVSSSIPVVGLANGILKRNPRGCRGICNCLSCASFRLNAEKAFEFSRNQLLDTEELALDLMKELSTLRSMLEKSVSEANGLATISADPVQEACRRASNVEDITRNRLSQMKEDLYVHCRTKPLQRPRVNFSGSVTEKVVGTRRKQMGRDAKSRTVKH*

Click here to download the sequence:
Link to NCBI Protein BLAST