Transcript Information: R_Transcript_117553.p1


Annotated TAIR IDAT5G02030.1
Annotated Gene NamePOX (plant homeobox) family protein
Annotated Gene Symbol(s)LSN, PNY, HB-6, BLR, RPL, BLH9, VAN
Annotation TypeHomolog
Chromosome Positionchr5:395754-398872 | Forward length=575
E-Value1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0211797442293
Replicate 21.8341595765962
Replicate 32.1063666755083
Condition 2: 8 Hour
Replicate 11.801259030602
Replicate 21.5935341082224
Replicate 31.836024982292
Condition 3: 24 Hour
Replicate 13.4832535104103
Replicate 21.2168418698249
Replicate 33.0189937499169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117553.p1 GENE.R_Transcript_117553~~R_Transcript_117553.p1 ORF type:complete len:435 (+),score=58.92,POX|PF07526.7|1.9e-25,Homeobox_KN|PF05920.7|3.3e-18,Homeobox|PF00046.25|1.1e-08 R_Transcript_117553:387-1691(+)
ATGGAAGACACTTCTTTCCGCCCATTTTACATCACTCAACAAAGCAGAAGACACAAGCTCCGTTCCACTCCTCTAAACGACGACGTCGAATTCACTCTCATGTCCCCACCACAACCAGAACCAGTACTCACTTGTTCTACTTTAGCCGCGACAACATCAACCTGTGGTGGTGGACTGAATTTATCTCTCTCCACCCACACGCGCTCTTCCGGCGCCTATAATGTAACCCCGGTGGGTCCCTTCACTGGCTACGCCTCCATTCTTGGCCGATCTAGGTTTCTAAGGCCCGCTCAGGAGCTTCTCGAAGATTTCTGCCGTGATAATGGAGTTTCCTTTGACAAGGAAACCTCCAAGCTTCTCCAAGATTCTGGAAACTGGTTCGCTCATGATGAGGCTGACATTTCTCGCCGTTGTAACAACCCTACCCTCCTCTCCTTGCTCCATGAGGTCTACAAGAGATATAAACTATACTGCCAACAGATGCACTCAGCTGTTACATCGTTTGAATCTGTGGCTGGTCTTGAGAATGCTGCCCCATTCACATGCTTTGCGATCAAAGCCATGTTCAGGCACTTCCACAGCTTGAAAAATGCCATTCTGGATCATATTCGTGTTACCAGTAAAGTTTTTGGTGGTGTAGACATTAGGAGAGATTGTACTTCAGGTTCATGCTCAGCAGATAAAGGCCGCTGTGAGCATAAGCAGACCCTTGATTCAAACTTCATTCAGCATCCTGTGTGGAGATCCCAGAGAGGATTTCCGGATAAAGCAGTAGCTGTGCTGCGGACTTGGCTTTTTGAGCACTTTCTACACCCCTATCCTAGTGATTCTGACAAGCAAATGTTGGCACAGAAGACTGGTCTATCTAGAAGTCAGGTGTCTAATTGGTTCACCAATGCCAGAGTTAGGCTGTGGAAGCCAATGGTGGAAGAAATGCATTTCCTTGAGAGAAAAGCTCAATGCTCCAACGCCGCTGATACTTCAAAATTTGATTTGCCAATTGACCATCAATTTTCCGCGCAACCTCAGCTCTCTCAGGAGGATTGTCATGTTTACATGCATAGAGATCAAGATGGCCATTATAAGCGTACTAGGATTGAAGTGTTCTCAAGAGCAGAACAGAACAAGGAACAATTCGGCATCCCTTGCAAACACCTTCCTAGCAACCAGGCCATTGGTTTTGTTGGCAGCGAAACGACAGATATTCGTCACTCTACTGTATTAGGCAGCAATCAAGAACCTGCAACTGGATTATCATGGTCTACTCCTGGGCAGATTGTTCCTTTTTGGTTAGCGAAACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117553.p1 GENE.R_Transcript_117553~~R_Transcript_117553.p1 ORF type:complete len:435 (+),score=58.92,POX|PF07526.7|1.9e-25,Homeobox_KN|PF05920.7|3.3e-18,Homeobox|PF00046.25|1.1e-08 R_Transcript_117553:387-1691(+)
MEDTSFRPFYITQQSRRHKLRSTPLNDDVEFTLMSPPQPEPVLTCSTLAATTSTCGGGLNLSLSTHTRSSGAYNVTPVGPFTGYASILGRSRFLRPAQELLEDFCRDNGVSFDKETSKLLQDSGNWFAHDEADISRRCNNPTLLSLLHEVYKRYKLYCQQMHSAVTSFESVAGLENAAPFTCFAIKAMFRHFHSLKNAILDHIRVTSKVFGGVDIRRDCTSGSCSADKGRCEHKQTLDSNFIQHPVWRSQRGFPDKAVAVLRTWLFEHFLHPYPSDSDKQMLAQKTGLSRSQVSNWFTNARVRLWKPMVEEMHFLERKAQCSNAADTSKFDLPIDHQFSAQPQLSQEDCHVYMHRDQDGHYKRTRIEVFSRAEQNKEQFGIPCKHLPSNQAIGFVGSETTDIRHSTVLGSNQEPATGLSWSTPGQIVPFWLAKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST