Transcript Information: R_Transcript_117631.p1


Annotated TAIR IDAT3G18930.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6524110-6525345 | Reverse length=411
E-Value2E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3005795274861
Replicate 20.46429165539725
Replicate 30.84422865833486
Condition 2: 8 Hour
Replicate 10.96258928539539
Replicate 21.7031629903606
Replicate 30.89197103785685
Condition 3: 24 Hour
Replicate 11.1281477753172
Replicate 20.81284737925961
Replicate 31.075562883877


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117631.p1 GENE.R_Transcript_117631~~R_Transcript_117631.p1 ORF type:complete len:407 (+),score=-22.08,zf-RING_2|PF13639.2|8.8e-15,zf-RING_11|PF17123.1|3.4e-11,zf-rbx1|PF12678.3|4.5e-08,zf-C3HC4|PF00097.21|5.3e-06,zf-C3HC4_2|PF13923.2|5.8e-06 R_Transcript_117631:85-1305(+)
ATGGCGGCCAAACCACCAGACCACCACCACAACAACCACCCCGCCGCAGCTCCAACCACGCCATCAACCTCTCTCCTGATCAACCAATCTCCACCGTCGAAACTACCGATCGACTTCAGTCCACCGTTGATCGCGATGGTAGTAGTAGCAGCAGCAGCTTTCTTACTCGTAACCTACTCTCGACTAATCTCTCGCCACCTCTTCCCTCCCTTCCTCCGCCTCCTCCGACGCTACAGACGGTGGCGCCGACTACGACGCCTCCGCCGCGCTCACTTCCCGCCATCTGACCTCGGGTCTCCTCCTCCACCTTACGAATCGTCCGACGGTTTCTACTTCTACTCCCCGTACGGCCTCGACGAATCCGTGATCAAGACCATCCCTCTCACCATATTCGAACTCCCTAAGAGTAACAACAAATTAACCTCCAAATTAGGGTTAAAAATCGAAGAGGAATTCAACGACTGTGCAGTATGTTTGTTAGAATTCGAAGACGGTGATTACATCCGTACGTTACCTCTCTGTTCACACTCATTCCACGTGGACTGTATCGACATGTGGCTTCAATCACACGCCACGTGTCCCCTCTGCCGGTCCGGAGTCTTCCTACCACCGCCGATAGTCGACTCGCCGTTAACTCCGTTAATGGCGTCGAGAATCCGGCCAAGCCTCGACGAAGGCTTCCTCCTTGAGAGCATCTTTCTGGAGCCATTACCGGAAGGACCTGAACAAAATTCCGGCGAAATTCAGCCGGTAACAAGATCAGATGATTTCTTCAGTACTCAATCCGAAGATCAGCGTCCACGAGAACACGATTTCCTGCTAAAAAGATCGTACTCGTTCGGTTTCGAAAGGAGCTTCCCTTCGGAAAGGATAGTTCTAGAGGCAGCGACGACGCCGTATCATCAGAACAGGAGACGGAGCTTCTTCTGGACAAAACGACCTTCATCGTCAACGCCGTTCAGCTCGATCGCGAAATCGAGAGTGTTCTCATTCAGGTTAAAGTCGCCAGGAGGATTCTTCCGGCGGAAAACATTCTTTCCGTTCTCGGAATCGTCAGCGAGTTTCCGTGGAAGCTCGTCGTCAAGGAGGATGAAGTTTCTAGCGTCGCCGTTGTTCGGAAGACAGGCGACGCCGGCGATGTTCTCGTCAAGTAGAATGAGGTGTGGAGATCCGGAGGCATTGCTGTCGCCGGAGAGGTATGGGAGAGAAGTGAATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117631.p1 GENE.R_Transcript_117631~~R_Transcript_117631.p1 ORF type:complete len:407 (+),score=-22.08,zf-RING_2|PF13639.2|8.8e-15,zf-RING_11|PF17123.1|3.4e-11,zf-rbx1|PF12678.3|4.5e-08,zf-C3HC4|PF00097.21|5.3e-06,zf-C3HC4_2|PF13923.2|5.8e-06 R_Transcript_117631:85-1305(+)
MAAKPPDHHHNNHPAAAPTTPSTSLLINQSPPSKLPIDFSPPLIAMVVVAAAAFLLVTYSRLISRHLFPPFLRLLRRYRRWRRLRRLRRAHFPPSDLGSPPPPYESSDGFYFYSPYGLDESVIKTIPLTIFELPKSNNKLTSKLGLKIEEEFNDCAVCLLEFEDGDYIRTLPLCSHSFHVDCIDMWLQSHATCPLCRSGVFLPPPIVDSPLTPLMASRIRPSLDEGFLLESIFLEPLPEGPEQNSGEIQPVTRSDDFFSTQSEDQRPREHDFLLKRSYSFGFERSFPSERIVLEAATTPYHQNRRRSFFWTKRPSSSTPFSSIAKSRVFSFRLKSPGGFFRRKTFFPFSESSASFRGSSSSRRMKFLASPLFGRQATPAMFSSSRMRCGDPEALLSPERYGREVNI*

Click here to download the sequence:
Link to NCBI Protein BLAST