Transcript Information: R_Transcript_117635.p1


Annotated TAIR IDAT1G72310.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL3
Annotation TypeOrtholog
Chromosome Positionchr1:27226405-27227379 | Forward length=324
E-Value2.6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45130947415513
Replicate 20.11536428800164
Replicate 30.37758358674976
Condition 2: 8 Hour
Replicate 10.13453771949036
Replicate 20.24572397627677
Replicate 30.29920237286352
Condition 3: 24 Hour
Replicate 10.12614179795442
Replicate 20.12118274115702
Replicate 30.54117951148922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117635.p1 GENE.R_Transcript_117635~~R_Transcript_117635.p1 ORF type:complete len:364 (-),score=-27.99,zf-RING_2|PF13639.2|8.7e-10,zf-rbx1|PF12678.3|3.5e-08 R_Transcript_117635:242-1333(-)
ATGGCGGCCAAACCACTAGACCACCACCATAACCCCGCCGCAGCTCCAACCACGTCATCAACCTCTCTCGTGATCAACCGATCTCCACCGTCGAAACTACCGATCGACTTCAGTCCACCGTTGATCGCGATGGTAGTAGTAGCAGCAGCTGCTTTCTTACTCGTAACCTACTCACGCCTAATCTCTCGCCACCTCTTCCCTCCCTTTCTCCGCCTCCTCCGACGCTACAGACGGTGGCGCCGACTACGCCGCACTCACTTCCCGCCATCTGACCTCGGGTCTCCTCCACCTTACGAATCCTCCGACGGTTTCTACGTCTACTCCCCGTACGGCCTCGACGAGTCCGTGATCAAGACCATCCCTCTCACCATATTCGAACTACCTCTCTGTTCACACTCGTTCCACGTGGACTGTATCGACATGTGGCTTCGATCACACGCCACGTGTCCCCTCTGCCGGTCCGGAGTCTTCCTACCACCGCCGATAGTCGACTCGCCGTTAACTCCGTTAATGGCGTCGAGAATCCGGCCAAGCCTCGACGAAGGCTTCCTCCTTGAGAGCATCTTTCTGGAGCCATTACCGGAAGGACCTGAACAAAATTCCGGCGAAATTCAGCCGGTAATAAGATCAGATGATTTCTTCAGTACTCAATCCGAAGATCAGCGTCCACGAGAACACGATTTCCTGCTAAAAAGATCGTACTCGTTCGGTTTCGAAAGGAGCTTCCCTTCGGAAAGGATAGTTCTAGAGCCAGCGACGACGCCGTATCATCAGAACAGGAGACGGAGCTTCTTCTGGACAAAACGACCTTCATCGTCAACGCCGTTCAGCTCGATCGCGAAATCGAGAGTGTTCTCATTCAGGTTAAAGTCGCCAGGAGGATTCTTCCGGCGGAAAACATTCTTTCCGTTCTCGGAATCGTCAGCGAGTTTCCGAGGAAGCTCGTCGTCAAGGAGGAACATGAAGCCTCTAGCTTCGCCGTTGTTCGGAAGACAGGCGACGCCGGCGATGTTCTCGTCAAGTAGAATGAGGTGTGGAGATCCGGAGGCATTGCTGTCGCCGGAGAGGTATCGGAGAGAAGTGAATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117635.p1 GENE.R_Transcript_117635~~R_Transcript_117635.p1 ORF type:complete len:364 (-),score=-27.99,zf-RING_2|PF13639.2|8.7e-10,zf-rbx1|PF12678.3|3.5e-08 R_Transcript_117635:242-1333(-)
MAAKPLDHHHNPAAAPTTSSTSLVINRSPPSKLPIDFSPPLIAMVVVAAAAFLLVTYSRLISRHLFPPFLRLLRRYRRWRRLRRTHFPPSDLGSPPPYESSDGFYVYSPYGLDESVIKTIPLTIFELPLCSHSFHVDCIDMWLRSHATCPLCRSGVFLPPPIVDSPLTPLMASRIRPSLDEGFLLESIFLEPLPEGPEQNSGEIQPVIRSDDFFSTQSEDQRPREHDFLLKRSYSFGFERSFPSERIVLEPATTPYHQNRRRSFFWTKRPSSSTPFSSIAKSRVFSFRLKSPGGFFRRKTFFPFSESSASFRGSSSSRRNMKPLASPLFGRQATPAMFSSSRMRCGDPEALLSPERYRREVNI*

Click here to download the sequence:
Link to NCBI Protein BLAST