Transcript Information: R_Transcript_117648.p1


Annotated TAIR IDAT4G33990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2758
Annotation TypeOrtholog
Chromosome Positionchr4:16290141-16292612 | Reverse length=823
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0231661959554
Replicate 21.125258487597
Replicate 32.0367744756628
Condition 2: 8 Hour
Replicate 11.8192908182484
Replicate 21.7975861163438
Replicate 32.3877879987842
Condition 3: 24 Hour
Replicate 12.8522488882166
Replicate 22.1491117067554
Replicate 32.9592390015172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117648.p1 GENE.R_Transcript_117648~~R_Transcript_117648.p1 ORF type:complete len:821 (+),score=142.25,PPR|PF01535.16|11,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.61,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0039,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.047,PPR|PF01535.16|0.00065,PPR|PF01535.16|0.03,PPR|PF01535.16|0.018,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.9e+03,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.078,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|20,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|7.6,DYW_deaminase|PF14432.2|4.2e-39,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.091,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|48,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|23,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|1.2e+04 R_Transcript_117648:218-2680(+)
ATGATTCTACATTTGGTGCTTTACAGATCAGCATCATGTCTGGCTAGAACTTGGCTGAGGCCTTGGGCACATCTGTCAATATCAACAGTTTCCAATCGTTTGCGACCTTCACTAGATGGCTTTGAGAATAAGAAAACACAAGCCAATATTGAGCATCTTTTCGAGTTGTGCAACACAACACAAGTGCTTAAAAGGGTCCATGCCCTTCTCGTCGTCTCTGGAACAACTCAAAGTGTTTATGTTAAAACTAGGCTCATTAATCTGTATGCCCATTTTGGGAACCTCTCTTTTGCTCATAAAACTTTTGATGATATCCCATCAAAAGATGCTTACACTTGGAATTCGATGATAGCTGCATATGTGCGCGTTGGGTGTTGTAAAGAAGCTTTGCAATGTTTCAACAATCTGGTGTCATCTTCCAAGGTTTCACCTGATAACTACACCTTTCCACCAGTCTTGAAGGCTTGTGAAAACCTAATTGATGGAAAGAAAATTCACTCTTGGGTTCTCAAATTGGGCTTCTTGTGGGATGTCTTTGTGGCTGCTTCTCTGATTCACATCTATTCCAGGTTTGGTTTTGTCGCTGATGCAAGGAACCTGTTTGAAAATATGCCGTTCCGAGATTCAGCTTCTTGGAATGCTATTATATCTGGATATTGCCTGAATGGAATTCCAGAGGAAGCACTAGACTTTGTTGGCAAAATGAGAAAGGAGCACATAAATCTGGATTCCGTTACTGTTGCTAGTATTCTTCCTGTTTGTGCTCAAGTTGGTGACTTTTTGAGTGGAATTCTGATACATTTATATGCTATAAAGCATGGTTTGGAGCACGAAGTTTTTGTTTCCAATGCTTTGATTAATATGTATGCAAAATTTGGCTATGTGCGACTAGCTCAGAGGGTTTTTGATTTTATGTTCGCTAAGGACTTGGTTTCATGGAACTCAGTTATTGCTGCATATGAGCAGAATGACAACCCAGTGTCTGCTATTAGACTTTTCAGGAAGATGCAATGTCATGGATTCAAGCCTGATTTGCTCACGCTAGTGAGTCTTTGTTCAAGTGTTGCTCTACTTGGGGATTTTAGAAATAGCAGATTGCTTCATGGGTTTGTTATTAGGAGAGCTTGTTTCATGGGCAATGTCATACTGGGCAATGCTGTTTTGGACATGTATGCAAAATTAGGAATCTTGGATTATGCACGGAAGCTGTTCCAACAGATGCCTGTAAAAGATATTATTTCATGGAACACTTTGATTACAGGGTTCTCTCAAAATGGCTTTGCCAGTGACGCTATAGATGCATTCTGCATCTTGGAAGCCTGTATGGAATTAAGTCCCAATCAGGGGACTTGGGCGAGCGTGCTACCAGCTTATTCTCATCTTGGGGCATTGCAACAGGGTATGAAAGCTCATGGGCGAATTGTTAAGACGCCTCTTTACTTGGATACTTTTGTTGGTACCTGTCTTGTTGACATGTATGGGAAATGTGGTCAATTAGACAATGCATTAACCTTGTTCTATGAGATTCCAAGGACATGCTCTGTACCCTGGAATGCCATCATATCCTGCCATGGAATCCATGGGCATGGTGAGATATCTCTCATGCTCTTTCAAGAAATGCTGCAGGATGGAGTGGATCCTGACCATGTAACCTTTCTGTCACTGTTGTCTGCTTGTAGCCACTCTGGACTTGTCAATGAAGGTCAATGGTGCTTCCATCTGATGCAGAATGAATATGGAATCAGACCTAGTCTGAAACATTATGGCTGCATGGTAGACTTGCTTGGGAGGGCTGGCTTGTTAGAGAAGGCATATGAATTTATTAAGAGCATGACCATACAGCCAGATGCTTCCATTTGGGGTGCTCTTGTTTCTGCTTGTCGAATACACGGAAATATTGAACTCGCAAAATTTGCTTCTGATCAGTTATTTACAATTGATTCAGAAAATGTAGGATATTACGTTTTAATGTCAAATATTTATGCAAATGTGGGGAAATGGGAAGGAGTTAATGAGCTGAGATCATTAACTTGGAGTAGGGGGTTGAAAAAGACTCCTGCATGGAGTTCCATTGAAGTGAACAACAAGGTTGATGTCTTCTATGCTGGTAACAAGTCTCATCCAAACTGCAGAGAAATCTACAGGAAGTTGCACATCATAACAGAGGAAGTAAAGAGCATTGGGTATTGTCCAGACTTTAGTTTTGTGCTTCAGGATGTTGAAGAGGATGAGAAGGAGCACATTCTATCTAGTCATAGTGAAAGATTGGCTATAGCCTTTGGACTGATTAGCACCGCTCCTAAAACCACTCTAAGGATCTTCAAGAATTTGAGGGTTTGTGGAGATTGTCACAACTGGACCAAGTTAATATCTAAAATTAGTGAAAGGGATATCGTTGTGAGAGATTCTAATCGATTCCATCACTTCAATGATGGGGTTTGTTCTTGCGGGGATTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117648.p1 GENE.R_Transcript_117648~~R_Transcript_117648.p1 ORF type:complete len:821 (+),score=142.25,PPR|PF01535.16|11,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.61,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0039,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.047,PPR|PF01535.16|0.00065,PPR|PF01535.16|0.03,PPR|PF01535.16|0.018,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.9e+03,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.078,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|20,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|7.6,DYW_deaminase|PF14432.2|4.2e-39,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.091,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|48,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|23,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|1.2e+04 R_Transcript_117648:218-2680(+)
MILHLVLYRSASCLARTWLRPWAHLSISTVSNRLRPSLDGFENKKTQANIEHLFELCNTTQVLKRVHALLVVSGTTQSVYVKTRLINLYAHFGNLSFAHKTFDDIPSKDAYTWNSMIAAYVRVGCCKEALQCFNNLVSSSKVSPDNYTFPPVLKACENLIDGKKIHSWVLKLGFLWDVFVAASLIHIYSRFGFVADARNLFENMPFRDSASWNAIISGYCLNGIPEEALDFVGKMRKEHINLDSVTVASILPVCAQVGDFLSGILIHLYAIKHGLEHEVFVSNALINMYAKFGYVRLAQRVFDFMFAKDLVSWNSVIAAYEQNDNPVSAIRLFRKMQCHGFKPDLLTLVSLCSSVALLGDFRNSRLLHGFVIRRACFMGNVILGNAVLDMYAKLGILDYARKLFQQMPVKDIISWNTLITGFSQNGFASDAIDAFCILEACMELSPNQGTWASVLPAYSHLGALQQGMKAHGRIVKTPLYLDTFVGTCLVDMYGKCGQLDNALTLFYEIPRTCSVPWNAIISCHGIHGHGEISLMLFQEMLQDGVDPDHVTFLSLLSACSHSGLVNEGQWCFHLMQNEYGIRPSLKHYGCMVDLLGRAGLLEKAYEFIKSMTIQPDASIWGALVSACRIHGNIELAKFASDQLFTIDSENVGYYVLMSNIYANVGKWEGVNELRSLTWSRGLKKTPAWSSIEVNNKVDVFYAGNKSHPNCREIYRKLHIITEEVKSIGYCPDFSFVLQDVEEDEKEHILSSHSERLAIAFGLISTAPKTTLRIFKNLRVCGDCHNWTKLISKISERDIVVRDSNRFHHFNDGVCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST