Transcript Information: R_Transcript_117659.p1


Annotated TAIR IDAT1G80770.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)PDE318
Annotation TypeOrtholog
Chromosome Positionchr1:30355266-30357786 | Forward length=451
E-Value9.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9736618907456
Replicate 25.8568627477042
Replicate 37.3542683861331
Condition 2: 8 Hour
Replicate 14.7683000160425
Replicate 27.7674642185171
Replicate 35.8276223570716
Condition 3: 24 Hour
Replicate 17.7331561188056
Replicate 25.3396942577187
Replicate 34.3775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117659.p1 GENE.R_Transcript_117659~~R_Transcript_117659.p1 ORF type:5prime_partial len:190 (+),score=35.90,NOG1|PF06858.10|6.9e-17,MMR_HSR1|PF01926.19|2.2e-12 R_Transcript_117659:2-571(+)
GTTGGGAAATCATCTCTGGTTCGTGTGCTTTCAACAGGGAAGCCTGAGATTTGCAATTATCCCTTTACCACCAGGGGGATCCTAATGGGTCATATTGCTTTGAATTATCAGCATTATCAGGTAACTGACACTCCTGGTCTACTCAGGCGATCTGATGAGGAGAGGAACAACTTGGAGAAGCTGACTCTTGCAGTACTCTCACATTTGCCAACTGCAGTACTCTTTGTTCATGACTTGACAGGAGAATGTGGAACTTCACCTTCTGATCAGTTCATCATATACAAAGAAATGAGAGAAAGATACAACGATCATCTTTGGCTTGATGTTGTTTCCAAGTGTGACCTCTCGCGTGTCTCTCCTCCAGTTTTTGCAACTGAAGATTCAAGTACTGATAATCCCGATTTAGCGAGATATCGGATTTTTGGACCTGAAGGAGCTATTTCTGTATCTGTAATGAGTGAAACCGGTCTTGATGAGTTGAAGAAAAAAGTTCAGGAATTGCTCAGCTCCCAGTCCGCGAGGATCAAAAGTCAGATACCAGATCCAGATAGTGTGGGAATTCCGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117659.p1 GENE.R_Transcript_117659~~R_Transcript_117659.p1 ORF type:5prime_partial len:190 (+),score=35.90,NOG1|PF06858.10|6.9e-17,MMR_HSR1|PF01926.19|2.2e-12 R_Transcript_117659:2-571(+)
VGKSSLVRVLSTGKPEICNYPFTTRGILMGHIALNYQHYQVTDTPGLLRRSDEERNNLEKLTLAVLSHLPTAVLFVHDLTGECGTSPSDQFIIYKEMRERYNDHLWLDVVSKCDLSRVSPPVFATEDSSTDNPDLARYRIFGPEGAISVSVMSETGLDELKKKVQELLSSQSARIKSQIPDPDSVGIPT*

Click here to download the sequence:
Link to NCBI Protein BLAST