Transcript Information: R_Transcript_11780.p1


Annotated TAIR IDAT2G35585.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14936889-14937873 | Forward length=156
E-Value2.7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.703774102412
Replicate 28.7484585067909
Replicate 311.453368798076
Condition 2: 8 Hour
Replicate 110.202443728019
Replicate 217.391796987589
Replicate 317.647399214265
Condition 3: 24 Hour
Replicate 111.691475902997
Replicate 29.5981219246031
Replicate 314.591803124598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11780.p1 GENE.R_Transcript_11780~~R_Transcript_11780.p1 ORF type:3prime_partial len:108 (+),score=32.62 R_Transcript_11780:597-917(+)
ATGATGAGAAATTGCTTCTGGAGTTCCTTTGCCAAGGAATGGAATGCTTCATTGTCAATGGAAGAGAGGGAGGTGCTGCCCCAAACCTCTGATGTTCCTGGGGCTAGTACTGGACCAGCTGATGTTGTTCATGGAATTGATGTTGCAGTAGAATTCAAGCCCGTTGAACATCCAACTGAACCTCTCGACAATGATAAGCCAGTCAAGTGCCCACTACCAGAACCGTCCATTCTAAATGATGGAAGAATATGGAAGGAGCGGGTTTCTGCTGCAAATGTGCAGAGGATAAGTGACATACCACTCATGAAAGATGGCACAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11780.p1 GENE.R_Transcript_11780~~R_Transcript_11780.p1 ORF type:3prime_partial len:108 (+),score=32.62 R_Transcript_11780:597-917(+)
MMRNCFWSSFAKEWNASLSMEEREVLPQTSDVPGASTGPADVVHGIDVAVEFKPVEHPTEPLDNDKPVKCPLPEPSILNDGRIWKERVSAANVQRISDIPLMKDGTG

Click here to download the sequence:
Link to NCBI Protein BLAST