Transcript Information: R_Transcript_117870.p1


Annotated TAIR IDAT5G20635.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6979314-6981767 | Reverse length=251
E-Value8.9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79048256103113
Replicate 21.8185772014116
Replicate 31.0822080754088
Condition 2: 8 Hour
Replicate 11.5424166895903
Replicate 20.44017483939342
Replicate 30.21438910181559
Condition 3: 24 Hour
Replicate 10.63269547477925
Replicate 21.7366345583132
Replicate 30.51703239417868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117870.p1 GENE.R_Transcript_117870~~R_Transcript_117870.p1 ORF type:3prime_partial len:254 (+),score=3.39,G-gamma|PF00631.18|2.7e-12 R_Transcript_117870:818-1576(+)
ATGGATAGTGTCGGATCCGGGCCAGGGTCCGGGTCCGGGTCGGGTAGCAGCTCTCGGATGGGCATAGGGTCATCAACTCCGTCTCTACCACCGCCCCGCCCGAAGTCACCACCGGACTTGTATGGGAGGAGAAGAGACTTGGCTAGGCTTCAAATGCTTGAGAGAGAAAAACGTTTTCTTGAGGAGGAATTGAAATTTGTCGAGGGTCTTCCACCTGCTTCCAAATGCTGCAAAGAGGTGGTTGATACTGTCACGGCAAATGTAGATCCTTTTGTCCCAACAAATCGGAAGAGTCGGAAATCATGTCGCTTATGGAAGTGGCTGTGTGGATCATCTTGCTTCAGTTTGTCATGGATTTGTTGCTGTACTGGGTGTTCGGTCCATCCCAAAGTGCCGAAATGCTGTCACTGCTGCAGCACTTCCTGCTGCAGTTTACCGGACTGCAATGTCTGCTGCGGTTTGCCGGACTGCTGCTCCTGTACCAGCTGTTCATTACCAAAGTGTAAATGTAGTTGTTCGTGCAATCCCTGCTCGTGTTGCTGTACTAAGAATTTGTGTTCAACGAGCTGTTGCAGTTTCAAGCCTTTAAAATCTCTTTGTAGCTCCGACTGTTGTGGCTCTTCTAGCTGTAAATGCTCATGTCCAAAATGTTCATGCCCGACATGTTCATGCCCTAAATGCTCGTGCCCAAAATGTTCCGACTTATGTGGTTGTTTCAGCTGTATAAGGAATTGTTGCTGCTGTTCATGCAGCTGTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117870.p1 GENE.R_Transcript_117870~~R_Transcript_117870.p1 ORF type:3prime_partial len:254 (+),score=3.39,G-gamma|PF00631.18|2.7e-12 R_Transcript_117870:818-1576(+)
MDSVGSGPGSGSGSGSSSRMGIGSSTPSLPPPRPKSPPDLYGRRRDLARLQMLEREKRFLEEELKFVEGLPPASKCCKEVVDTVTANVDPFVPTNRKSRKSCRLWKWLCGSSCFSLSWICCCTGCSVHPKVPKCCHCCSTSCCSLPDCNVCCGLPDCCSCTSCSLPKCKCSCSCNPCSCCCTKNLCSTSCCSFKPLKSLCSSDCCGSSSCKCSCPKCSCPTCSCPKCSCPKCSDLCGCFSCIRNCCCCSCSCT

Click here to download the sequence:
Link to NCBI Protein BLAST