Transcript Information: R_Transcript_11789.p3


Annotated TAIR IDAT1G31940.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11470293-11471154 | Reverse length=158
E-Value6.8E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.392593275851
Replicate 218.896670374668
Replicate 320.407820767481
Condition 2: 8 Hour
Replicate 114.246321423852
Replicate 220.531355145089
Replicate 322.276976670475
Condition 3: 24 Hour
Replicate 116.696587074694
Replicate 215.238178869853
Replicate 320.693829885794


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11789.p3 GENE.R_Transcript_11789~~R_Transcript_11789.p3 ORF type:complete len:110 (+),score=22.13 R_Transcript_11789:280-609(+)
ATGGTGGGTATTTTCTCGAAATTCTCTACTGGCAAAACTGGGCATAGAAGAACTCAAAGTGCACTTGAAGAGAGGGAGGTGCTGCCCCAAACCTCTGATGTTCCTGGGGCTAGTACTGGACCAGCTGATGTTGTTCATGGAATTGATGTTGCAGTAGAATTCAAGCCCGTTGAACATCCAACTGAACCTCTCGACAATGATAAGCCAGTCAAGTGCCCACTACCAGAACCGTCCATTCTAAATGTGAGTGATGAATGTTGTGTACCTCTATCTTCTGAAGTCAAGTATGTACTCAAACTTTATCACTGCCCCCCCCCCCTCTTTTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11789.p3 GENE.R_Transcript_11789~~R_Transcript_11789.p3 ORF type:complete len:110 (+),score=22.13 R_Transcript_11789:280-609(+)
MVGIFSKFSTGKTGHRRTQSALEEREVLPQTSDVPGASTGPADVVHGIDVAVEFKPVEHPTEPLDNDKPVKCPLPEPSILNVSDECCVPLSSEVKYVLKLYHCPPPLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST