Transcript Information: R_Transcript_117904.p1


Annotated TAIR IDAT5G48130.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19516291-19518450 | Forward length=625
E-Value2E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.203876594326
Replicate 22.339855172693
Replicate 33.2675286912788
Condition 2: 8 Hour
Replicate 13.1289515385781
Replicate 23.5551476329968
Replicate 34.9087565124969
Condition 3: 24 Hour
Replicate 16.2085006172989
Replicate 24.7191044282959
Replicate 36.3093829260893


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117904.p1 GENE.R_Transcript_117904~~R_Transcript_117904.p1 ORF type:complete len:673 (+),score=115.88,NPH3|PF03000.10|4.1e-56 R_Transcript_117904:359-2377(+)
ATGGAAGCTTTGAGCCCCAGAGATTCTTCTGTTCTATCTAGTCCTTACTCCTCACCGAATCTCAGTGCTCTACTCAAGATTAAGATCATATCATGGAGCCAGGAGACAGGATTACCAGTAACAGTTCGTGTTCGTGTTGCTGATAAATCTTTCAACTTACACAAGTTTCCACTGAAGGCAAAAAGCGGATACTTCAAGAGGCAATTAAGTGAATGGCAAGAGGTTGATCTTCCAGGAAACTTCCCAGGAGGTTCAGAGACATTTGAGATGATTGCGCTGTTCATCTATGGTTCCTCGACCTTTATTGACCCCTTCAATGTCGCTTCCCTTAGGTGTGCAGCAGAATTTCTAGAGATGTCAGAAACTTATTGCTCTGGAAACCTCTGTGATAGAACAGACCTTTACTTAAACCAAGTGGTATTACAATCTTGGGATGATACCCTAATTGTCCTCCAAAAATGCCAAACCTTACTCCCTTGGTCCGAGGACCTTCTCATTGTGAGTCGCTGTATTGAATCCCTTGCCTTTATGGCTTGTATGGAAATTCTTGACCCCGAGAGGAAAAGATCAGACCGACCAGTTATGTCTTTGGAAGCACTAACTAGCCAACCCTGGAGTAGCGAAGTAGTGAAGGAGATCATTTCTCAAGATCTTTGGATCAAAGATCTTATTGCTTTGCCATTCAGATTCTTCAAAAGGATTGTTGGGTCCTTAAGAAGACAAGGAATGAAAGAGAAATATGTCGGCCCTATCATTGTTTTCTATGCCACCAAATGGGTTCTCTTAAAGAAGACAAGACAGTTTTGGGAATGTCTGTGTGATGATGATGGAGATAGCATTAGTAACATTGATTCAAGTGACAAGGTGGTTGAGGCGCTTCAAGGAATCCTTGATCTGCTGTCAATGGGAGAGAAGATTAATAGAGTGATTCCTGTTGGCTTCTATTTTGCTTTGCTAGCAAGATCTCTCGAGGTTGGAGGAACTAGCGAGGGCAGGGCAAAGCTGCAAGAGCAGATAGTCCATCTTCTGCCCTTGGCTCATGTGCAAGATTTTCTTCTCCCTCGAAAGGCAACTGAATCTTTCCCCTCTTGTGTTGAACTGGCTACAATGGAGAACATATTTGCCTGTTATGTTTCGTCTACCATGGAAACTGAACAAAGCCTTTCAACAGGAAACACAATTGTTGCAGAACTGTGGGATATGTATCTCTCTCGGATAGCTTCTAATCCTAGCTTAACGCCTAAGAGATTCATGGATCTTATTGAGAATGTGCCCCTATCCTACAGAATGAATCATGACCATCTATACAGAGCTATGAATGCCTATCTCCAGGCACATCCAAGTTTGTCACAGGAAGAGAAGGGTTTGGTTTGCAAGTACCTGAACTGCCAGAAGCTATCACAGGAAGTTTGTGTTGAAGCAGTACAGAACGAGTTTATGCCACTCCGATTAATTGTTCAAGCACTCTTTATTCAACAGCTGAACACTCAACAAGCCTTCAAGGAGTGTTCCGAGTCATTCAGGTTTGCATACTCGGGGGAATTTTCTGGAAGTCTTTCAAGCTCGAGATATCCAAACTCCAAAAGCCAGAATCTAGGAGAGAGTCCCTTCATGGATGGTGGTGGTGAAATAGTAGTCAATAGACCTTTAAGCTGCTTGCTAGAAAAAGATAATCTAGCTTTTCAAGGACCTGATAATATGGCTAAAAAGGAGTATGAATCAACGAGCTTCAGAATTCAGAATCTCGAACAAGAACTCCTGTCTCTGAAGAAAAACCTTCATTTGCAGAAAGTAGGCCAGGAAACAGAACAAGGGCCACCAAAAATAAGACCATATGGGTTGGAAGGAAGGTCCTTCAGCAAGAGAAGGAACGCAATTGGACAAGTCACTGGCTGTATTGGGTCTGTGAACTTTGCTTCCCAGAGGAAATACGCTGGCCGGTTATTGAAGATCTTTCGAAGGATAACCTTGTTTGGAAGACCAAAACCAAAAAGACGGCCAAGTGGTTCAGGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117904.p1 GENE.R_Transcript_117904~~R_Transcript_117904.p1 ORF type:complete len:673 (+),score=115.88,NPH3|PF03000.10|4.1e-56 R_Transcript_117904:359-2377(+)
MEALSPRDSSVLSSPYSSPNLSALLKIKIISWSQETGLPVTVRVRVADKSFNLHKFPLKAKSGYFKRQLSEWQEVDLPGNFPGGSETFEMIALFIYGSSTFIDPFNVASLRCAAEFLEMSETYCSGNLCDRTDLYLNQVVLQSWDDTLIVLQKCQTLLPWSEDLLIVSRCIESLAFMACMEILDPERKRSDRPVMSLEALTSQPWSSEVVKEIISQDLWIKDLIALPFRFFKRIVGSLRRQGMKEKYVGPIIVFYATKWVLLKKTRQFWECLCDDDGDSISNIDSSDKVVEALQGILDLLSMGEKINRVIPVGFYFALLARSLEVGGTSEGRAKLQEQIVHLLPLAHVQDFLLPRKATESFPSCVELATMENIFACYVSSTMETEQSLSTGNTIVAELWDMYLSRIASNPSLTPKRFMDLIENVPLSYRMNHDHLYRAMNAYLQAHPSLSQEEKGLVCKYLNCQKLSQEVCVEAVQNEFMPLRLIVQALFIQQLNTQQAFKECSESFRFAYSGEFSGSLSSSRYPNSKSQNLGESPFMDGGGEIVVNRPLSCLLEKDNLAFQGPDNMAKKEYESTSFRIQNLEQELLSLKKNLHLQKVGQETEQGPPKIRPYGLEGRSFSKRRNAIGQVTGCIGSVNFASQRKYAGRLLKIFRRITLFGRPKPKRRPSGSGS*

Click here to download the sequence:
Link to NCBI Protein BLAST