Transcript Information: R_Transcript_117935.p1


Annotated TAIR IDAT5G45540.1
Annotated Gene NameProtein of unknown function (DUF594)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18458294-18460705 | Reverse length=803
E-Value5.5E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0224887484453
Replicate 21.4249566764524
Replicate 32.0939677026954
Condition 2: 8 Hour
Replicate 10.84784850925364
Replicate 20.83621026275902
Replicate 31.2067552767016
Condition 3: 24 Hour
Replicate 12.4166112871267
Replicate 21.5273724993475
Replicate 31.5157690226383


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117935.p1 GENE.R_Transcript_117935~~R_Transcript_117935.p1 ORF type:complete len:722 (+),score=64.24,DUF4220|PF13968.2|9.5e-78,DUF4220|PF13968.2|2.9e+03,DUF594|PF04578.9|1.5e-24 R_Transcript_117935:237-2402(+)
ATGAGTGTAGTATCAGCCATCCAAAGACTATGGAGCAATTGGGACCGAAGAGTGTTTGTTCTCTTAAGTCTTTTCCTCCAGACATGGCTGATCATAGTGGCTCCTTTTCGAAAGCGAAGTGCAAACAAGTTGATCCTTATCCCCATCTGGTTTGCCTACCTTCTAGCTGATTGGGCTGCCAATTTCGCCATTGGGCTCATTTCCAACAGCTTAGGTGACCCCTCTACCACCATTGAACGGTCCAACCTCTTAGCCTTTTGGACCCCCTTCTTGCTAGTCCACCTTGGTGGTCCCGACACCATCACCGCCTTTGCATTGGAGGATAATGAGCTCTGGCTCCGTCACTTCCTCCAGCTCGGTGCTCAGGTTGGGGCTACTGGGTATGTCTTCTACCAGTCTTTTCCAAACAACAACAACCGCCACCTGTTCATACCAACCTTGCTCATGTTCTTTACTGGCCTCATAAAGTACGGGGAACGCACGCGGTCCCTGTACTTAGCCAGCCTAGACAGCTTCCGTGACTCAATGCTCACGGAACCTGATCCTGGCCCCAACTATGCCAAACTCTTGGAAGAGTACTCGGCCAAAATGAGGGCCATGCTCCCAACCAAGATTGACTCCAAACCCGGCCCTGGGCGTATAGCCTATCGGAACAACCAGGGATCAGATGACGAAAAACTTACAGAGACCAAGATGGTGAAAGATGCCCATAATTTCTTCACAATGTTCAGGGGACTGATTGTGGACCTCATTTATAGCTTCAGGGAGCGGTCGGAGACAATGAAATACTTCCTCAATATAAAAGACCCAGCTAAAGCTTTTCAGGTAGTGGAGATTGAGCTTAATTTCATGTATGATGTTTTGCACACCAAAGTTGTGGTAGTCCATAGTTGGTTTGGTTATATGCGTCGGTTTGTTTGTACTGGTTTGACTTTGGTTTCCCTTTGGTTTTGGATTTCCTTAGACAAGGGGAAGCTCCATTGGTTTGATATCAACGTCACCTATACGCTCCTTGTAGGGGCTCTTTCCCTTGATGTAATCGCTTTTGTGATGCTCGTCTTCTCCGATTGGCTGATTGCTGACATAAAGGCATCATGGCTCCGCAATAACAACTGGGTGGATTCCATGCTCAACTCCTTACTGGGCTTCAGGAAGTCGATTAAGGCCTCCATCTTAAGGCTCCTGTTTCGTCGTTGGTCTGAGACTATCTCTCAGTTCAACTTGATAGATTTTTGTGTCAACAAGCGGTACTTTAAGACTGTGGAGTACTGGTTGTATGAGAAAACACACACCCTAAAGTATCTTGATGGTTGGAAGTATGTCTCCCATAAAAGGTTTAGCGATGAATTGAGGAATTTCATCTTTCACGAGATGAAAAGAAAGGCAGAATGGGCGAAATATCACAATTTCGAGGATATTTGCTCAGCGCGAGGCAATTGGGCGCTCCAACACAGTGACAGTGATGTCCTGTTTGATCCTTCAGACTTTAATCCTTGGATAAATGAGGTTGAGTTTGACCAGAGCCTCCTGATTTGGCATATAGCCACCGAGCTATGCTACAATACGGAAGAAAACAATGAAGGAATTAGCAGCAAGTACCGAGAGCTGAGCAAACAGTTATCAGATTACATGCTCTACCTGGTAATCAGGCTGCCGAATCTGATGTCTGCAGTGGCAGGGATCAGCGAGTTCAGGTTCAGGGACACGTGTGCTGAGGCGAAGAAATTCTTTGAGATGCACCCTGTGAACAAACCTGAAAAGCTATGGGTGAAGCGAGTAGCACAGGCCTTTCATTTAAGTGCAGCACGGAAACAAACAAGACAGAAGAACGCGTCTAAATCACTCCTAGACATTGACTCGCCCTTGGTTGAACCTAAAAGGCTCAAGGGAGATCGAAGCAAGTCAGTTCTGTTCGATGCTTGTAGGTTGGCACACAAGCTGAAGAAATTGGAAGGGAAGTCAAAGTGGGAGATTATTAGCCAAGTTTGGGTGGAAATGCTTTGTTATGCTGCTAATCATTGCAGGGCAAGCGCCCACGCTGCTCAGCTCAGTAAAGGTGGACAGCTCATAACTATAGTTTGGCTGTTGATGGCTCATTTTGGTTTAGGACCACAGTTTAGGATCAATGAGGGAAATGCAAGGGCAAAATTGCTTGTTGATAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117935.p1 GENE.R_Transcript_117935~~R_Transcript_117935.p1 ORF type:complete len:722 (+),score=64.24,DUF4220|PF13968.2|9.5e-78,DUF4220|PF13968.2|2.9e+03,DUF594|PF04578.9|1.5e-24 R_Transcript_117935:237-2402(+)
MSVVSAIQRLWSNWDRRVFVLLSLFLQTWLIIVAPFRKRSANKLILIPIWFAYLLADWAANFAIGLISNSLGDPSTTIERSNLLAFWTPFLLVHLGGPDTITAFALEDNELWLRHFLQLGAQVGATGYVFYQSFPNNNNRHLFIPTLLMFFTGLIKYGERTRSLYLASLDSFRDSMLTEPDPGPNYAKLLEEYSAKMRAMLPTKIDSKPGPGRIAYRNNQGSDDEKLTETKMVKDAHNFFTMFRGLIVDLIYSFRERSETMKYFLNIKDPAKAFQVVEIELNFMYDVLHTKVVVVHSWFGYMRRFVCTGLTLVSLWFWISLDKGKLHWFDINVTYTLLVGALSLDVIAFVMLVFSDWLIADIKASWLRNNNWVDSMLNSLLGFRKSIKASILRLLFRRWSETISQFNLIDFCVNKRYFKTVEYWLYEKTHTLKYLDGWKYVSHKRFSDELRNFIFHEMKRKAEWAKYHNFEDICSARGNWALQHSDSDVLFDPSDFNPWINEVEFDQSLLIWHIATELCYNTEENNEGISSKYRELSKQLSDYMLYLVIRLPNLMSAVAGISEFRFRDTCAEAKKFFEMHPVNKPEKLWVKRVAQAFHLSAARKQTRQKNASKSLLDIDSPLVEPKRLKGDRSKSVLFDACRLAHKLKKLEGKSKWEIISQVWVEMLCYAANHCRASAHAAQLSKGGQLITIVWLLMAHFGLGPQFRINEGNARAKLLVDK*

Click here to download the sequence:
Link to NCBI Protein BLAST