Transcript Information: R_Transcript_117936.p1


Annotated TAIR IDAT5G45480.1
Annotated Gene NameProtein of unknown function (DUF594)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18426296-18428929 | Reverse length=877
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0140533863733
Replicate 20.2916152835597
Replicate 30.3181491332799
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.45948456022036
Replicate 30.30399589842913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117936.p1 GENE.R_Transcript_117936~~R_Transcript_117936.p1 ORF type:5prime_partial len:144 (+),score=15.11,DUF4220|PF13968.2|1.5e-22 R_Transcript_117936:3-434(+)
GGGATTGCATTTGACTTTGAGGCCCTAACTATGCGAGGCCCCTGTGCCGTCGCACAGGTTGAACCCCCAAAGAGCCGGCCCTGGAGGTCGGAGACAGTGAAATACTTCCTCAATATAAAAGACCCAGCTAAAGCTTTTCAGGTAGTGGAGATTGAGCTTAATTTCATGTATGATGTTTTGCACACCAAAGTTGTGGTGGTCAATAGTTGGTTTGGTTATATTTGTCGGTTTGTTTGTACTGGTTTGACTTTGGTTTCCCTTTGGTTTTGGATTTCCTTAGACAAGGGGAAGCTCCATTGGTTTGATATCAACGTCACCTATACGCTCCTTGTAGGGGCTCTTTCCCTTGATGTAATCGCTTTTGTGATGCTCGTCTTCTCCGATTGGCTGATTGCTGACATAAAAGCATCATGGCTCCGCAATAATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117936.p1 GENE.R_Transcript_117936~~R_Transcript_117936.p1 ORF type:5prime_partial len:144 (+),score=15.11,DUF4220|PF13968.2|1.5e-22 R_Transcript_117936:3-434(+)
GIAFDFEALTMRGPCAVAQVEPPKSRPWRSETVKYFLNIKDPAKAFQVVEIELNFMYDVLHTKVVVVNSWFGYICRFVCTGLTLVSLWFWISLDKGKLHWFDINVTYTLLVGALSLDVIAFVMLVFSDWLIADIKASWLRNNN*

Click here to download the sequence:
Link to NCBI Protein BLAST