Transcript Information: R_Transcript_117969.p1


Annotated TAIR IDAT3G53470.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19822813-19823298 | Forward length=136
E-Value4.4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.523283976375
Replicate 210.44743450666
Replicate 312.504644195001
Condition 2: 8 Hour
Replicate 19.6997146167831
Replicate 212.854806469087
Replicate 314.731741952778
Condition 3: 24 Hour
Replicate 19.094397066047
Replicate 28.8434129851107
Replicate 38.1418031927106


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117969.p1 GENE.R_Transcript_117969~~R_Transcript_117969.p1 ORF type:complete len:207 (+),score=15.85 R_Transcript_117969:996-1616(+)
ATGTTTCGCAACAACAAGCTTATATTTTATCGACATAAGTCATTGCAAAAAGCGCCTTTATTGCAAGGAGTAAAAGTCACTGTGTTAGCCTTTTGCAACAGCCAGACCCTCAACGACATCTTGTTTTTTGCAACGAATATTAGCGTTGCTATAAACATATTTTCTTGTGGTGAAAGGATGCCAATGGATATTCTGGCTATAAGGCCAATACCCAGCAAAGGGATATCAGTCTCCTACAACTTGTCAAATCGCTACAACTACAGTTCACTCTTCTCTGCATCGTTCAGGACTTTCTGCTCCAGGAAAGGTTCTCAGCAACCTCAACCACACGATGAAAATGACAAGAATGCTGGTGATAAATCGCCCATTGATTGGGACAGAGCGTGGTCAAGCTTCAAGAAGCAAGGGAAAAAATCCTTCTCCTCCAACTTCTCTCCAAACAAGTACGTAAGCTGGAATCCAAGACGTTCAAACTACCCGCTTTCGGAAGAGGTTGATCCCATCAAGAGAGCAGAGAAATCAAACCTCATGTTATGGACCAGCCCTAGGTTTACTCTAGGTGGAGCTATAGCGATAGTCTCATTGTTGTTGATTTACACCATTCTTGCTCCTATGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117969.p1 GENE.R_Transcript_117969~~R_Transcript_117969.p1 ORF type:complete len:207 (+),score=15.85 R_Transcript_117969:996-1616(+)
MFRNNKLIFYRHKSLQKAPLLQGVKVTVLAFCNSQTLNDILFFATNISVAINIFSCGERMPMDILAIRPIPSKGISVSYNLSNRYNYSSLFSASFRTFCSRKGSQQPQPHDENDKNAGDKSPIDWDRAWSSFKKQGKKSFSSNFSPNKYVSWNPRRSNYPLSEEVDPIKRAEKSNLMLWTSPRFTLGGAIAIVSLLLIYTILAPMK*

Click here to download the sequence:
Link to NCBI Protein BLAST