Transcript Information: R_Transcript_117988.p1


Annotated TAIR IDAT1G19980.1
Annotated Gene Namecytomatrix protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6933162-6934643 | Forward length=342
E-Value2.5E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 21.1762633286441
Replicate 31.4757842148782
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 21.315345990658
Replicate 32.1354836023985
Condition 3: 24 Hour
Replicate 13.5369170798984
Replicate 21.4827064800388
Replicate 31.716682720541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117988.p1 GENE.R_Transcript_117988~~R_Transcript_117988.p1 ORF type:internal len:357 (+),score=53.74 R_Transcript_117988:3-1070(+)
GAACTCTTTCTTTTTCTCTCTCTTGTTCTTCTTCTTCTTCATCTCCTTCGTCATCATATTCATCTCCTGCACTTTCTCGCTCTAAAATTGGCGCGCACAATGGGCATTGTAAAGAAGAAACGCGGTCAAATCTCATCTGACCGAGCGAAATGGGAAGTAATATTTAAAGCTCTCAAGCTCACTTTACTCAAACAGAAATCCCAAATCGAATCTCTTCTTGAACAGCGTAATCTTCTAGAACTACGTCTTCGGAATTTTTATCAACGTTATGTTTCCGATCTTTACCTTGCTGATGACCAAATCTCTCAGTTGGAAAGACAAATTTCCTCGGCTGAGTTGGCGAAATTGGTTGAAACTGCCAAAGCGAATTTGCTTGCGGGGTCCAAGCAAACGGATGCTCTTGTTTATAAGCTTAAATTAGAACATGCTGAGAATGAATTGAATGATTTTAAAGCCTGGTTTGACATCCTGTCTCATAGATGTTCCAATCAAGAGCACATCTCTCCAAATAAGCTATATGAATGTTTAAAAGCAAAAGATGGGATAGATAACTCTTCTAAAGATTTATCTGTGCATAGTTATAAACCACTAGAAAAGGAAGTGGCCAGGCTAAAACGTGAATATGAGAAGCTCTCTGTGAAAAATAGTTCCGACATATCTGCCCTTCAAGCAGAAATAAGCTTTGTCTGGAATCAATACAAAGAAATGGAGAGCAACTACACTAATCAACTGCAGACTAAGCATCACGAAATCAGTCAAACAAATGAGAAGGTCGCGGAACTCCTGGCTGGTATGGAGCAATTGCAGTCATCAAATGCAGAAAAGGATGCCACGGTTGCGACTCTAAGAGACAATATAACTACGTTGGAGAGCATGACAAATGAAAAAGATGGAGAAATCTCCAGACTGACCAAAGAATTAGAGTTGTTAAGAGCTATAACTACTGCTGGCCTACCGGTGTTAAAGAACTGGTCAAATGAACCATCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGATCAAGGAATGCATCTCAGGAGGAAGAAACTTATCTGCAGCAGCTAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117988.p1 GENE.R_Transcript_117988~~R_Transcript_117988.p1 ORF type:internal len:357 (+),score=53.74 R_Transcript_117988:3-1070(+)
ELFLFLSLVLLLLHLLRHHIHLLHFLALKLARTMGIVKKKRGQISSDRAKWEVIFKALKLTLLKQKSQIESLLEQRNLLELRLRNFYQRYVSDLYLADDQISQLERQISSAELAKLVETAKANLLAGSKQTDALVYKLKLEHAENELNDFKAWFDILSHRCSNQEHISPNKLYECLKAKDGIDNSSKDLSVHSYKPLEKEVARLKREYEKLSVKNSSDISALQAEISFVWNQYKEMESNYTNQLQTKHHEISQTNEKVAELLAGMEQLQSSNAEKDATVATLRDNITTLESMTNEKDGEISRLTKELELLRAITTAGLPVLKNWSNEPSSSSLTGSRKSRSRNASQEEETYLQQLK

Click here to download the sequence:
Link to NCBI Protein BLAST