Transcript Information: R_Transcript_118093.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value6E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2491800228563
Replicate 21.3931194589013
Replicate 35.4281368711262
Condition 2: 8 Hour
Replicate 113.229329876711
Replicate 22.9673208130483
Replicate 35.7637815714025
Condition 3: 24 Hour
Replicate 14.5698004908226
Replicate 27.9440742923406
Replicate 33.7343951124564


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118093.p1 GENE.R_Transcript_118093~~R_Transcript_118093.p1 ORF type:5prime_partial len:211 (+),score=9.33,Chal_sti_synt_C|PF02797.11|8.3e-69,Chal_sti_synt_N|PF00195.15|1.4e-20,Chal_sti_synt_N|PF00195.15|4e+03,ACP_syn_III_C|PF08541.6|6.9e-07 R_Transcript_118093:1-633(+)
GGGGCCCGGGTTCTTGTCGTCTGTTCCGAGATCACCGTCATCTGCTTCCGCGGGCCCACCGAGACCCACCTCGACTCCATGGTGGGCCAGGCATTGTTTGGTGACGGAGCCGGGGCGGTGATCGTTGGGGCCGACCCGGATGAGTCCGTGGAGAGGCCCATCTTCCAGCTGGTCTCGGCGGCCCAGACAATCTTGCCGGACTCCGAAGGCGCCATCGACGGACACTTGCGTCAAGTGGGCTTAGCCTTCCATCTCCTCAAGGACGTTCCCAGGCTCATCTCCACTAACATCGGCAAGGCCCTAAACGACGCGTTTAGTCCCATCGGTATCGAAGACTGGAACTCCATCTTCTGGGTGGCCCACCCGGGTGGGCCCTCAATACTGGACCAGGTGGAGTCCAAACTCGGGCTTAAGGAAGACAAACTCAGTGCGAGTCGGCACGTGCTGAGCGAGTTCGGCAACATGTCAAGTGCTTGTGTGCTCTTCATTTTGGATGAGATGAGAAAGAGGTCTGTCAAAGAAGGGAAGGCCACCACTGGAGGAGGCTTTGACTGGGGAGTCTTGTTCGGGTTCGGGCCGGGCCTCACTGTTGAGACCGTTGTGCTTCACAGTGTTCCTACAATCAACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118093.p1 GENE.R_Transcript_118093~~R_Transcript_118093.p1 ORF type:5prime_partial len:211 (+),score=9.33,Chal_sti_synt_C|PF02797.11|8.3e-69,Chal_sti_synt_N|PF00195.15|1.4e-20,Chal_sti_synt_N|PF00195.15|4e+03,ACP_syn_III_C|PF08541.6|6.9e-07 R_Transcript_118093:1-633(+)
GARVLVVCSEITVICFRGPTETHLDSMVGQALFGDGAGAVIVGADPDESVERPIFQLVSAAQTILPDSEGAIDGHLRQVGLAFHLLKDVPRLISTNIGKALNDAFSPIGIEDWNSIFWVAHPGGPSILDQVESKLGLKEDKLSASRHVLSEFGNMSSACVLFILDEMRKRSVKEGKATTGGGFDWGVLFGFGPGLTVETVVLHSVPTINN*

Click here to download the sequence:
Link to NCBI Protein BLAST