Transcript Information: R_Transcript_118167.p1


Annotated TAIR IDAT5G66800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26671433-26672116 | Forward length=183
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5942976234961
Replicate 24.291214683623
Replicate 36.1864911756032
Condition 2: 8 Hour
Replicate 13.5745788244154
Replicate 25.2229797001309
Replicate 32.2523896390261
Condition 3: 24 Hour
Replicate 14.5245313514453
Replicate 25.4735678998513
Replicate 35.4319851047774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118167.p1 GENE.R_Transcript_118167~~R_Transcript_118167.p1 ORF type:5prime_partial len:137 (-),score=46.95 R_Transcript_118167:35-445(-)
GTAGTTTCTTCAGATTTTGAGTTCTCTGTTTCAAACCACAACATGTTAAGTGCTGATGAGCTCTTCTTTAAGGGTAGGCTTTTACCCTACAAAGATAACATCAACAACAATGGTGGTAATATGCAAAGGACTCTAAGAGATGAGCTTCTTCTTGGTGATGATGATCAAGATGATCTTGGCTTCTCTCTCAAACCTCCTAAAGCTTCTTCTTCTTCTAATAGGTGGAAAGGCTTTTTGGGTCTTAGAAAATCCCACATTGGCTCCAAAAAGCCTGACAAATGTGACTTCTCCTTTGATTCTGCTCCCAAAAAGTTTGCTTTTCCTACTCAAGATCCAACTGTCTTCAAATCTTCCCAGGAAATGGTGAGCAATGAAGGTCCAAGTAGCAGTGACATGGAGATGGGGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118167.p1 GENE.R_Transcript_118167~~R_Transcript_118167.p1 ORF type:5prime_partial len:137 (-),score=46.95 R_Transcript_118167:35-445(-)
VVSSDFEFSVSNHNMLSADELFFKGRLLPYKDNINNNGGNMQRTLRDELLLGDDDQDDLGFSLKPPKASSSSNRWKGFLGLRKSHIGSKKPDKCDFSFDSAPKKFAFPTQDPTVFKSSQEMVSNEGPSSSDMEMGI*

Click here to download the sequence:
Link to NCBI Protein BLAST