Transcript Information: R_Transcript_118303.p1


Annotated TAIR IDAT1G20410.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7079049-7082504 | Reverse length=504
E-Value1.4E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9877948312084
Replicate 24.3400174044862
Replicate 36.3132163207273
Condition 2: 8 Hour
Replicate 16.7028345386314
Replicate 26.4542582595601
Replicate 39.5659325988259
Condition 3: 24 Hour
Replicate 112.740086692469
Replicate 29.8981701911157
Replicate 311.045750409961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118303.p1 GENE.R_Transcript_118303~~R_Transcript_118303.p1 ORF type:complete len:537 (+),score=109.34 R_Transcript_118303:164-1774(+)
ATGGCCGGAACAGACGCCGGAGTTGCCTCACTTTCCGGAGACGTGGAGAAAAATATCTCCAGCAACTCCGACGAAGAGATTCGCCTCCTTGACGACGTCGTTCGCTCGTTTCCACCTCAAGCTGTCCACCTCTTGCTCTCCCTCGGGGTTTGTCCTCAGTGTATTCTTCGGCTATTTGGAAAACATGGAGTGAGTTACTCCAGCTCGTCTTGCGTTTTGAGTTTATTAACAGCCGTCGTTGGTCAGGAGCTCAGCACTGATGAACTTTCATCTAAAGGTTCAGATGATGAGAATAGTGTTTGCAAAGTTTGTTATGGTATTCTGCAGTTTATTTATGTTGATGAGAAACAAGGTTTAGTAAAGAAAAATTGTGCCAATGATTTGGCTGTATCTATATGTGAACTATCGAGACGAGAAGGGCATCAAGTTGATGGCTTTTCTCTTGAAGTCTCCATTCCGCAATTTGTTTTAGACAAGGAGAATGATGTCAGGTTATTAATGAAAGAGAAGTATGGTTTTGAAGCTTGGTTCCGTGAAATACTTGAGTGTGAAATCATTTCAGTCAAGGATGCTTTGAAGCTATCTATTACTCAACCCTTAGAGACACTATTTGGTGTGAAATCTGGTTCAAGCTCATTTCGTTTTCGGTTGACTTACACCTCTTCTGAGCTTCAAGTGAAGAGTGAAAATGGCAAGGACAGCAATCAAGCTTCCAAGAGAAGGAAAACAGGGAATGGCAATGATGTTCCTGAACTTGGAAAAGAACTGATTCTGAAGAAATGTTCAAGCAGTTCACCAGATACAAAAGTTTCCAACTCCTACAAACCTTTAGTTGGGAAGGTGTCAGCCTGCTCCCTGGCAATTGTTTGTTACAGGATGCCTATCTATATCGGTGGTAGATACTTGAAGTACTCAAGAAACGTAAGTCAAACACGTTGGATCATTGATGATGAGAGAATGGGGGAAGCATCTGTTGAGGAAATTGTGGCCGGTGGCATTCTTCCACTTTGCAGAGGTGATAATTACAAGTTCCATGCTGCCGGTAGAGAAGATATAGATGTTCGGATGTTGGGCTTAGGACGACCTTTCCTACTAGAAATACAAAATCCTCGTGTTGTGCCCTCAGAAATGTCTGTAAAGGAGGTGGAAGCGAAAATCAATGGCTTGGAAGGCAGATTGGTAAAGGTGAAAAACCTTAAGGTCGTTGATGATCAAGGTTGGAACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAGCAATATGCTGCCCTAGTATGGATTTCACGTCCACTCCAAGATAAAGACTTTGAAACTATATCCTCATTGAAGGAGATGAAGGTCTTGCAGAGAACTCCAGTCAGGGTGCTTCATCGTCGAAGTCCTCTAGAACGTGAAAAGATAATCCATTGGATGAACATTGAGAGAATTGCTGGAAGCACTCAATATTTTCTCTTGCATCTTTGTACTCAGGCTGGAACCTACATCAAGGAATTTGTTCATGGGGATCTTGGACGCACTTATCCAAGCATTGGTTCAATTCTAGGCTGCAGGGCTGAGATTCTCCAACTGGATGTAACAGATGTGAAGATGGACTGTTTCCTGAGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118303.p1 GENE.R_Transcript_118303~~R_Transcript_118303.p1 ORF type:complete len:537 (+),score=109.34 R_Transcript_118303:164-1774(+)
MAGTDAGVASLSGDVEKNISSNSDEEIRLLDDVVRSFPPQAVHLLLSLGVCPQCILRLFGKHGVSYSSSSCVLSLLTAVVGQELSTDELSSKGSDDENSVCKVCYGILQFIYVDEKQGLVKKNCANDLAVSICELSRREGHQVDGFSLEVSIPQFVLDKENDVRLLMKEKYGFEAWFREILECEIISVKDALKLSITQPLETLFGVKSGSSSFRFRLTYTSSELQVKSENGKDSNQASKRRKTGNGNDVPELGKELILKKCSSSSPDTKVSNSYKPLVGKVSACSLAIVCYRMPIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIVAGGILPLCRGDNYKFHAAGREDIDVRMLGLGRPFLLEIQNPRVVPSEMSVKEVEAKINGLEGRLVKVKNLKVVDDQGWNLMREGEAEKQKQYAALVWISRPLQDKDFETISSLKEMKVLQRTPVRVLHRRSPLEREKIIHWMNIERIAGSTQYFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSILGCRAEILQLDVTDVKMDCFLSE*

Click here to download the sequence:
Link to NCBI Protein BLAST