Transcript Information: R_Transcript_11832.p1


Annotated TAIR IDAT3G22430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7953455-7957605 | Forward length=510
E-Value1E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.179702949056
Replicate 226.576579112025
Replicate 333.243238691166
Condition 2: 8 Hour
Replicate 132.91312248167
Replicate 238.650549109812
Replicate 343.036323459426
Condition 3: 24 Hour
Replicate 151.18318016731
Replicate 241.074229750329
Replicate 349.090396936387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11832.p1 GENE.R_Transcript_11832~~R_Transcript_11832.p1 ORF type:complete len:523 (+),score=105.57,XS|PF03468.10|1.1e+04,XS|PF03468.10|9.8e-27 R_Transcript_11832:221-1789(+)
ATGGCCGGCGACAACCCCAAACCTTCCTCCTCCAACAAACGCCCTCCTTCTTCCTCTTCTTCGGACCGAAAATCCCGTTGGGAATCCTCCAAACCCAACGCCGCCACCACCGCCGCTTCCGTCAGCGACCCCAAAGCCCCCACCCAATCCTCCTCCAATAAACCCATCCCCAAACGTGGTACTAACCCTAACCCTAGCCCAGCCCACCCTAATCCAAGCCCAGCTAGAGCACCCGGCCCACATCCCCCTTTCCCATTCCCTGACCCGGGCCCACCACCTCCCCCAAGCTATGGCTTCCACATGCTTGACCGCCGTACAATAGTCCTCGCCGATGGTAGTGTCCGATCATACTTCGCCTTACCCCCTGACTACCAAGATTTCAATCCACCACCCCCAAGACCCCCACTTGGGTCGCCGATGGGCCGGCTCATGCCCCCACTTGGGCCGATGAGTCCGGAGGGATTCCGGGACCGGGAACGTGGCCAGGACTACTGGAAGTCACTTGAACAAGATGGGCGTGGCGGGCTGGAGGGGTCCACGAAGAGGAAGTTTGGAGAAGGGGAGGAGAGAGAAAGAGAAAGAGATGAGTTTGCAAGGCAAAGACAACATCTGTTACAGTATGGGAATGTCGGGGCGAGTTTAGGGACCGGTACGAGTAGTCCCTTTGGTAGGGATGATGAGTTTCGATCTTCCAAGTATATGCGAATTGGTGGTGGTGGTGTCGGACCTGGTGGAGGGTTTGAGAATAATTTGGGTATGATGATGATGATGAGGCAGGAAGTTGATCCTGCTGTGCTGAAGGCTGGTTTGAAGTTTGTGAAATTGATTAATGAGAATAGTAATCAGAAGAAGAATCTCGAGAATGGGAAATCTATTCAGTGCCTCGCTTGTGACAGGTCCTCAAAAGATTTCCAAGATGTACATGCCCTTATAATGCATGCTTACAACTCAGATAATGCTGATTTGCGTGTGGATCACCTGGGCTTCCACAGAGCGCTTTGTGTCATAATGGGGTGGAATTACTTGAGGCCTCCTGATAACTCCAGGGCTTATCAGTTTGTGCCTGCTGATGAAGCGGCTGCAAACCAGGATGATTTGATCTTGTGGCCGCCTATGGTGATCATTCATAACACAAATACCGGCAAGGGTAAAGATGGGCGCATGGAGGGTTTGGGAAATAAGACAATGGATAATAAACTTAGAGATCTTGGAATATTGGGAGGCAAGTCAAAATCATTGTACAGTAGGGAAGGCCACCTTGGCATTACCCTTATTAAGTTTGCTAGTGATCAGTCAGGCCTGAAGGAGGCCATGCGATTAGCTGACCATTTTGAGAGGGATTGCCATGGGCGTAGAGCTTGGGCCCATGTGCAATCTACAGCTAGTGGCAAGGATGATGAAAGTAATCCAAATCTCGTGATGGTGGATGAGAGAACGGGGGATAAGAGGAGAATTCTCTATGGCTATCTTGGGACAGCCTTTGACCTGGACAAACTGGATTATGACTCTCGAAAGAAGGTTGTCATAGAGAGCAAGTATGAAAAACTACAGCCACCTAAACCCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11832.p1 GENE.R_Transcript_11832~~R_Transcript_11832.p1 ORF type:complete len:523 (+),score=105.57,XS|PF03468.10|1.1e+04,XS|PF03468.10|9.8e-27 R_Transcript_11832:221-1789(+)
MAGDNPKPSSSNKRPPSSSSSDRKSRWESSKPNAATTAASVSDPKAPTQSSSNKPIPKRGTNPNPSPAHPNPSPARAPGPHPPFPFPDPGPPPPPSYGFHMLDRRTIVLADGSVRSYFALPPDYQDFNPPPPRPPLGSPMGRLMPPLGPMSPEGFRDRERGQDYWKSLEQDGRGGLEGSTKRKFGEGEERERERDEFARQRQHLLQYGNVGASLGTGTSSPFGRDDEFRSSKYMRIGGGGVGPGGGFENNLGMMMMMRQEVDPAVLKAGLKFVKLINENSNQKKNLENGKSIQCLACDRSSKDFQDVHALIMHAYNSDNADLRVDHLGFHRALCVIMGWNYLRPPDNSRAYQFVPADEAAANQDDLILWPPMVIIHNTNTGKGKDGRMEGLGNKTMDNKLRDLGILGGKSKSLYSREGHLGITLIKFASDQSGLKEAMRLADHFERDCHGRRAWAHVQSTASGKDDESNPNLVMVDERTGDKRRILYGYLGTAFDLDKLDYDSRKKVVIESKYEKLQPPKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST