Transcript Information: R_Transcript_118340.p1


Annotated TAIR IDAT1G48580.1
Annotated Gene Nameunknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17958403-17960610 | Reverse length=454
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3285382973371
Replicate 20.86377185256922
Replicate 31.0873451390579
Condition 2: 8 Hour
Replicate 10.85235605829018
Replicate 21.0614342646132
Replicate 32.4125558419502
Condition 3: 24 Hour
Replicate 11.6709796399911
Replicate 22.024058569072
Replicate 31.4545626532432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118340.p1 GENE.R_Transcript_118340~~R_Transcript_118340.p1 ORF type:3prime_partial len:316 (+),score=67.15,DUF4539|PF15072.2|1.7e-19 R_Transcript_118340:653-1597(+)
ATGATGGTTACCCTTAAGGACCCGGGTGATATGATTAGTGCCACTGTTCATCGGAAAGTCCTTAGCGTGGGGGACTTTGGGAAATTTATTGCTGCTGGCTCAGTTTTAGTACTTCAGAAGGTGGTTGCCTTTTCATCGTCATGTGCATCATGTTACCTAAATATAACAAGAAGCAATGTGGTCAAGGTAATCTCTGTGGACCGTGGAGTCAAAAATTTTCTTGAAGCAAGTTTTCTTGCTACTCCAGAAATACCACCTAAGACTGTGGACCTGATATCTAGAAGAACTGAAGGAGCAAGTGGAGATGTTGAACATAGCTATAATTTGAAAAGGAAGGCAGCAATCGAAAAGCAAATGGGAAAGGCAAACGCTTCCCAGGCAAGCAGCTTGGTTGGCAGCAAACAGATTGAGAGCGCACACAATAAAATTTCTGACTGTAGTCATTTTGACCTTGTTGATCCTGCTCCTATTGCTCAAGAAATTGGTAGTTCATATAGGAGCATTCAACCAGGTCCTGCAACAGCTGAAGGCAGGGCTAGAAACCTTGAGCATCATCATAGTTTTGAGAAGCACAGACAGGGAAGAGAGTTTTGTTCTGCCCCTTGCATACCTGAGAACCTAGATAGTCGATATGCTTGGCGGGGGAATGGTAAAATGGTACAAATGCTGAGAGACGGTAATAATTGTACCAAAATTAGGGCTGCAGAAATAGATATTCAAGTAGACAGTCCCTCTGGTACAAGTCCAAACATGGCAGGGAATCTCGATCATGTTGTCAGTTGTGGAGCAAATGATGTTCAAAATAAAAGCCAAGCAGGGGACTTCAGTTCCCCTTCAACTGTGGCTGAGAACTTAACCAACCAAGAGCTATATAATATTTGTGGGTCTCAAAAGCGAAGGCAGCTGACAGACACTGTGTTGAAGAGCATGGAAGCTAAACAAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118340.p1 GENE.R_Transcript_118340~~R_Transcript_118340.p1 ORF type:3prime_partial len:316 (+),score=67.15,DUF4539|PF15072.2|1.7e-19 R_Transcript_118340:653-1597(+)
MMVTLKDPGDMISATVHRKVLSVGDFGKFIAAGSVLVLQKVVAFSSSCASCYLNITRSNVVKVISVDRGVKNFLEASFLATPEIPPKTVDLISRRTEGASGDVEHSYNLKRKAAIEKQMGKANASQASSLVGSKQIESAHNKISDCSHFDLVDPAPIAQEIGSSYRSIQPGPATAEGRARNLEHHHSFEKHRQGREFCSAPCIPENLDSRYAWRGNGKMVQMLRDGNNCTKIRAAEIDIQVDSPSGTSPNMAGNLDHVVSCGANDVQNKSQAGDFSSPSTVAENLTNQELYNICGSQKRRQLTDTVLKSMEAKQD

Click here to download the sequence:
Link to NCBI Protein BLAST