Transcript Information: R_Transcript_118455.p1


Annotated TAIR IDAT1G63130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23412854-23414746 | Forward length=630
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3355825088819
Replicate 20.1280262220506
Replicate 30.4190256877345
Condition 2: 8 Hour
Replicate 10.14930405455637
Replicate 20.13634684049503
Replicate 30.88544442050668
Condition 3: 24 Hour
Replicate 10.97990640606054
Replicate 20.26896657183631
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118455.p1 GENE.R_Transcript_118455~~R_Transcript_118455.p1 ORF type:internal len:164 (+),score=28.56,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|7.7e-19,PPR_2|PF13041.2|2e-05,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|5.1e-06,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.026,PPR|PF01535.16|0.25,PPR|PF01535.16|0.0022,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|4.1e-05,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.00072 R_Transcript_118455:2-490(+)
ATCAATTGTTACTGCCGCTTGGGTCGAGTTGATTTGGGCTTCTCTCTTTTGGGTACTCTTATTAAGCTTGGGTTTGTACCTGATCGTGTCGTCTTCACTACCTTACTTGATGGCTTCATTCATTGTAATCAGCTGCCACAAGCTCTCTCCTTTTTGAATACCCTTCTTAATCAAGGCTTCCGACCTGACCTTGTCACTTATGGTGCTTTGTTTAAAGGCTTTTGTCGAGTTGGTGACAATGCTGGCGCTCTCTCCTTGCTTACCAAGATTGAATCTTCTGGCCTTTGTGAGCCCAACATTGTCATCTATTCCACCCTAATTGACAGCCTGTGCAACGAAAAGAAGTTAAATGAGGCCTTGAACCTCTTCTCAAAAATGCAAAGCAAGGGCATCTCCCCTGATGTTGTCTCCTACACCTCCTTACTTCGTGGTATTTGTAGTTTAGGCCGTTGGGATGAGGCTAAGGCTACATTTGCCGACATGTTGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118455.p1 GENE.R_Transcript_118455~~R_Transcript_118455.p1 ORF type:internal len:164 (+),score=28.56,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|7.7e-19,PPR_2|PF13041.2|2e-05,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|5.1e-06,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.026,PPR|PF01535.16|0.25,PPR|PF01535.16|0.0022,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|4.1e-05,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.00072 R_Transcript_118455:2-490(+)
INCYCRLGRVDLGFSLLGTLIKLGFVPDRVVFTTLLDGFIHCNQLPQALSFLNTLLNQGFRPDLVTYGALFKGFCRVGDNAGALSLLTKIESSGLCEPNIVIYSTLIDSLCNEKKLNEALNLFSKMQSKGISPDVVSYTSLLRGICSLGRWDEAKATFADMLE

Click here to download the sequence:
Link to NCBI Protein BLAST