Transcript Information: R_Transcript_118457.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value1.7E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.894132869815
Replicate 23.8239467874539
Replicate 34.7126846319234
Condition 2: 8 Hour
Replicate 13.0968631889433
Replicate 24.374135402323
Replicate 35.5403735620405
Condition 3: 24 Hour
Replicate 14.5296179521777
Replicate 24.2771581322367
Replicate 35.7579796478178


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118457.p1 GENE.R_Transcript_118457~~R_Transcript_118457.p1 ORF type:complete len:593 (+),score=92.51,PPR_2|PF13041.2|6.6e+03,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|9e-11,PPR_2|PF13041.2|7.8e-21,PPR_2|PF13041.2|1.3e-16,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|2.7e-19,PPR_2|PF13041.2|9.3e-22,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|5.2e-16,PPR_2|PF13041.2|5.3e-16,PPR_2|PF13041.2|0.00012,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|6.9e-10,PPR_1|PF12854.3|5.5e-11,PPR_1|PF12854.3|1.7e-16,PPR_1|PF12854.3|6e-12,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|9.2e-13,PPR_1|PF12854.3|0.0023,PPR|PF01535.16|0.00013,PPR|PF01535.16|2,PPR|PF01535.16|0.0031,PPR|PF01535.16|4e-08,PPR|PF01535.16|2e-07,PPR|PF01535.16|4.5e-08,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|1.6e-10,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|5.3e-06,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.049,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|24,PPR_3|PF13812.2|9,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|9.6e-07,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.09,MRP-S27|PF10037.5|3.9,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|0.0082,MRP-S27|PF10037.5|0.0002,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|2.6e+03,ATP13|PF12921.3|2.1e+02,ATP13|PF12921.3|6.8e+02,ATP13|PF12921.3|21,ATP13|PF12921.3|3e+02,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|2,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|0.52,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|5.9e+02,TPR_19|PF14559.2|3.9e+02,TPR_19|PF14559.2|3.5e+02,TPR_19|PF14559.2|4.9e+02 R_Transcript_118457:1616-3394(+)
ATGTTCAATTTCAATATTGTGGCAGATATTATTGTTATTCAACCGCTGCTCAATCGAATGACTTCTTTTAGGGAAAAATGCAATCTAGGGTTTCATGACCTCGATTCTCCTGTTCTTCTTTTCAATCAAATGACTTCTTTGCGTCCCCTGCCTTCCATTATTGATTTCAATCGCCTCTTTTCTTCCATTATCAAGACCAATCGACCCCCTAACGAACTCCATAAATACCACCTTGTCATTTCTCTCTTCAAACACCTTGGCTTGCCCGGTAATGCCTGTAATGGTAAACGTGTCCGCCCCAATCTTTATTCCTTTAACATCCTGATCAATTGTTACTGCCGCTTGGGCCGCCTTGATTTGGGGTTTTCCCTTTTGGGTACTCTCTTCAAGCTTGGGTTTCAGCCTAATTCTTTCGTCTTCAATACCTTACTTGATGGCTTCATCCACCTTCATCAGTTCCCCAAAGCTCTCTCCTTTTTGGATACGCTTGTTTACCTAGGCTTCCAACCTGACAATGTCACCTATGGTATATTGTTTAAAGGCTTCTGTCGAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTCGGAAGGTTGAATCTTCTGGCCTTTGTCAGCCTAACATTGTCATTTACAATACTCTCCTTGACAGCTTGTGCAAAGACAGGCTAGTAACCGAGGCCTTGACTCTCTTTTCTGAAATGAAAAACAAGGGCATCTCCCCTAATGTTGTCACCTACAATTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCTGTTGGGATGAGGCTAAGGAAGCATTGACCGAGATGTTAGAGAGCAATGTAGCACCAAATGTCCGAACCTATAGCACGCTTATAGACATGTATTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGTCTTGATGATTAAGAGGGGTGAGAGGCCTGACATTGTTACCTACAATTCCCTACTGGATGGATACTGTTTGCGCGGCCAAATGGATAAAGCATCTCAGTTGATGGATCTGATGGCAAGACATGGGTGCCAACCTGATGTTGTCACCTTCACCACAGTGATCAATGGCTATTGCAAGAGTAAAAACCTCGATGAAGCTTTCAAGTTGTTCAAGGAAATGCCTGTCAAAGGATTGAGCCCCAATGTAAATACATATAGCACTCTTCTAGATGGCTTGTGCAAGGGTAACAGGGTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAGATGTTGTCACCTTTAATACTTTGTTGGATGGCTTATGTAAGGATGGACAGCTTGATGAGGCTGTAACAATGTCTAAGGAGATGGAGAGGAATGGAGTGGTAAAGAACCTTGTGAGCTATAGTGTGTTAATTGATGGTATGTGTGAAAAGGGGAGATGGAAAGAGGCATCGGAAGTCTTCTCCAAGCTGATGGCCAAGGGATTGCAGCCAAATTGTATAACGTACACCGCAATGATAAAAGGACTTTGCAAGAAGGGGCTCTTAGATCAAGCTGATGAATTATTGAAGAAGATGGAGGAGCATGGCTGTTTTCCGAATGATCGTACCTACAATACCATTATTACTGGGTTCCTTTCCAACCACCAAATCACAAGAGGCCTGCAGCTTATTGAGATTATGACTAGCAGAGGTTTTGAAGCAGATGCTGAAACCTTGTCTTTATTCCTTGAATTGCTATCAGACGACCGTGTAGACAAGTCAGTCAAAGAGAAGCTTCAGAAATTCTGTGAACCATTAAATTACAATGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118457.p1 GENE.R_Transcript_118457~~R_Transcript_118457.p1 ORF type:complete len:593 (+),score=92.51,PPR_2|PF13041.2|6.6e+03,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|9e-11,PPR_2|PF13041.2|7.8e-21,PPR_2|PF13041.2|1.3e-16,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|2.7e-19,PPR_2|PF13041.2|9.3e-22,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|5.2e-16,PPR_2|PF13041.2|5.3e-16,PPR_2|PF13041.2|0.00012,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|6.9e-10,PPR_1|PF12854.3|5.5e-11,PPR_1|PF12854.3|1.7e-16,PPR_1|PF12854.3|6e-12,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|9.2e-13,PPR_1|PF12854.3|0.0023,PPR|PF01535.16|0.00013,PPR|PF01535.16|2,PPR|PF01535.16|0.0031,PPR|PF01535.16|4e-08,PPR|PF01535.16|2e-07,PPR|PF01535.16|4.5e-08,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|1.6e-10,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|5.3e-06,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.049,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|24,PPR_3|PF13812.2|9,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|9.6e-07,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.09,MRP-S27|PF10037.5|3.9,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|0.0082,MRP-S27|PF10037.5|0.0002,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|2.6e+03,ATP13|PF12921.3|2.1e+02,ATP13|PF12921.3|6.8e+02,ATP13|PF12921.3|21,ATP13|PF12921.3|3e+02,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|2,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|0.52,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|5.9e+02,TPR_19|PF14559.2|3.9e+02,TPR_19|PF14559.2|3.5e+02,TPR_19|PF14559.2|4.9e+02 R_Transcript_118457:1616-3394(+)
MFNFNIVADIIVIQPLLNRMTSFREKCNLGFHDLDSPVLLFNQMTSLRPLPSIIDFNRLFSSIIKTNRPPNELHKYHLVISLFKHLGLPGNACNGKRVRPNLYSFNILINCYCRLGRLDLGFSLLGTLFKLGFQPNSFVFNTLLDGFIHLHQFPKALSFLDTLVYLGFQPDNVTYGILFKGFCRVGNNVGALSLLRKVESSGLCQPNIVIYNTLLDSLCKDRLVTEALTLFSEMKNKGISPNVVTYNSLLRGLCSLGCWDEAKEALTEMLESNVAPNVRTYSTLIDMYCKEGEVEEAKSILVLMIKRGERPDIVTYNSLLDGYCLRGQMDKASQLMDLMARHGCQPDVVTFTTVINGYCKSKNLDEAFKLFKEMPVKGLSPNVNTYSTLLDGLCKGNRVQLALQLFKEMQAQGITPDVVTFNTLLDGLCKDGQLDEAVTMSKEMERNGVVKNLVSYSVLIDGMCEKGRWKEASEVFSKLMAKGLQPNCITYTAMIKGLCKKGLLDQADELLKKMEEHGCFPNDRTYNTIITGFLSNHQITRGLQLIEIMTSRGFEADAETLSLFLELLSDDRVDKSVKEKLQKFCEPLNYNG*

Click here to download the sequence:
Link to NCBI Protein BLAST