Transcript Information: R_Transcript_118499.p1


Annotated TAIR IDAT4G10890.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:6688833-6692937 | Forward length=527
E-Value1.7E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0258919229748
Replicate 22.133313946041
Replicate 32.0211827290723
Condition 2: 8 Hour
Replicate 11.8986365868185
Replicate 21.0761921741747
Replicate 31.6501464200352
Condition 3: 24 Hour
Replicate 13.5603016556333
Replicate 23.4203342664532
Replicate 33.7454895720894


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118499.p1 GENE.R_Transcript_118499~~R_Transcript_118499.p1 ORF type:complete len:374 (+),score=77.16,DUF2439|PF10382.5|7.6e-18,DUF2439|PF10382.5|1.5e-18 R_Transcript_118499:117-1238(+)
ATGGGAGATGTAAAGAGATGGACAGTGACTTACACAAAACATGTGAAGCAGAAGAGGAAAGTTTATCAAGATGGCATTCTTCATCTTCTTTCTAACAGCAAGGTGGTGCTCTATGATGAAACTGAGCAGCTACTAGACAGCAGGTTCTTGACGAAAGATGAAGCTGTGAAAGCTGGTGAATCGTTAGCATTTCCTTCTTTTCTCGTCGATATTGGGGATCCTGAATGCAATCCTAACGCTATCTCTCATCCAAAAGTCAAAACTGAAAATGAGAATACAACTCCTGAGAAAAATAGGTTGCCACAAGGACAGAAGTTCAGAAGTTCTTTTGTACTGAATTCTAAGGGGTTAGGAAAGCCTAATTCAATGCGAAGGAAGGCCTCAGCTATTAACTTAAGCCCTTCTCAGAAGATTATTCGAGAGTTTAAGAAAAATGAAGTACAAAAGTATAGTGTGCATCAGAGTCCTACAAGCACAGTAATCTCTTCCTATAAAGGTTGGTATAATGAATGGGAGGCATCGTATACAACTCAAATCACGCAAAAGGCCAAGAAATATCATGATGGTTTCATACGTGTGGTGATTTGTGGCTCCTATGGGAGGCAGGTAATGCTGTATGATTCCAGCAAAAATCAACTGGATAAAAGATTCCTAAAGAAGGACGAAGCGATCAGTTCTGGTCAATCGTTGACATTTGATGCTTATTTGGTTGATGTTGGAAATCCTATGGGAACCAAGGAAAATGATACTGATATCATGGCAGATGAACAAAAATGCAAGACGAATGGAAAAGGAGACACACTCACTGGCCGGCAATGGCAGAAGTCACTTGATTATTCAGCTTCTGAGACACACAGAAGGAAGGTGCCTGATAAACAGGATCATCAGAGGGCTTGTAATTTTGTTGTGATAGGACAATCTCGGCAGCATGCTGGTTCTGGTAAATGTGTTGCCTCGAATTCATTTGGTTTGGTTGTGAATCAGATGAATCTCGGGAAAAGAGATCCTTCTTATATGCCTATACGTGATGCATCTCAAATTCTATCCGTCTTGAAGAAACCTGTAGCTATGGAAAAAACTCCCATTGTGCAAGAAGCTCCAGTTGAGAAATGCTTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118499.p1 GENE.R_Transcript_118499~~R_Transcript_118499.p1 ORF type:complete len:374 (+),score=77.16,DUF2439|PF10382.5|7.6e-18,DUF2439|PF10382.5|1.5e-18 R_Transcript_118499:117-1238(+)
MGDVKRWTVTYTKHVKQKRKVYQDGILHLLSNSKVVLYDETEQLLDSRFLTKDEAVKAGESLAFPSFLVDIGDPECNPNAISHPKVKTENENTTPEKNRLPQGQKFRSSFVLNSKGLGKPNSMRRKASAINLSPSQKIIREFKKNEVQKYSVHQSPTSTVISSYKGWYNEWEASYTTQITQKAKKYHDGFIRVVICGSYGRQVMLYDSSKNQLDKRFLKKDEAISSGQSLTFDAYLVDVGNPMGTKENDTDIMADEQKCKTNGKGDTLTGRQWQKSLDYSASETHRRKVPDKQDHQRACNFVVIGQSRQHAGSGKCVASNSFGLVVNQMNLGKRDPSYMPIRDASQILSVLKKPVAMEKTPIVQEAPVEKCFP*

Click here to download the sequence:
Link to NCBI Protein BLAST