Transcript Information: R_Transcript_118567.p1


Annotated TAIR IDAT1G02420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:493683-495158 | Forward length=491
E-Value2.2E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.468167676267
Replicate 21.6506525484511
Replicate 31.6567766185896
Condition 2: 8 Hour
Replicate 11.6169910814218
Replicate 20.98444133892012
Replicate 32.3973825347681
Condition 3: 24 Hour
Replicate 12.2380252328894
Replicate 22.3581094411309
Replicate 33.3038044810411


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118567.p1 GENE.R_Transcript_118567~~R_Transcript_118567.p1 ORF type:complete len:318 (+),score=78.23,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|8.2e-15,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|2.7e-10,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|0.0014,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|54,PPR_1|PF12854.3|1.8e-13,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.3e-05,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|19,PPR|PF01535.16|0.17,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.002,PPR|PF01535.16|0.46,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.035,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.00088,PPR_3|PF13812.2|7.3e-06,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|2e+03,ECSIT|PF06239.7|0.027,ECSIT|PF06239.7|0.52 R_Transcript_118567:750-1703(+)
ATGGTTGATGCAAGGAATGTCTATCATGGTTTGAAGGGTCAGTTTAGGCCAAATTTGCAAACTTTTAATATATTGTTATCTGGGTGGAAGTCATGTGAAGAAGCTGAAGGGTTTTTTGAGGAGATGAAGGAGATGGGTGTGAAGCCTGATGTTGTTTCTTATAATAGTTTGATTGATGTGTATTGCAAGAACAAGGAGTTGGCGAAGGCATACCAAGTGTTCGATAAAATGCTTGAAAGAGAGGAGGGGTTTGTGCCTCCTGATGTGATTACGTTTACGAGTTTGATTGGGGGATTGGGTTTGGCTGGTCAGCCTGATAAAGCTAGGGATTTGTTGAGGGAGATGAAGGAGTATGGGTTTCAACCAGATGTTGCGGCTTATAATGCCGCCATTAGGAACTTCTGCATTGCTAAGAGGCTTGGCGATGCTGATGAGCTGATGGATGAGATGGTCGCAAAGGGGATGAGTCCCAACCCCACTAGTTATAATCTCTTCTTTAGGGTGTTTTATTGGTCGAATGACTTGAAGATTGCTTGGAGCTTGTACCTGAGGATGAAAGTGGCGGGATGTTTGCCTAACACTCAGTCTTGTATGTTTCTGATTAGGTTGTTTAGGAGGCATGAGAAGGTGGAGATGGCGCTTGAGTTGTGGAATGATATGGTGGACAAGGGTTTTGGGTCGTATATTTTGGTATCGGATGTGTTGTTTGATTTGCTTTGCGACTTGGGGAAGTTGTCGGAGGCACAGGAATGCTTCTTGCAGATGGTAGGGAAGGGCCAGAAACCAAGCAATGTTTCTTTTAGGAGAATTAAAGTGCTCATGGAATTGGCTAATAGGCATGAAGCTCTCAAGAACTTGTCAGAGAAGATGGCTATATTTGGACCACCCCTCAACGTTCGCAGACCAAATGAGGATTTCGATGATGATACATCTCTAAGAACAGTTGCACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118567.p1 GENE.R_Transcript_118567~~R_Transcript_118567.p1 ORF type:complete len:318 (+),score=78.23,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|8.2e-15,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|2.7e-10,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|0.0014,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|54,PPR_1|PF12854.3|1.8e-13,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.3e-05,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|19,PPR|PF01535.16|0.17,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.002,PPR|PF01535.16|0.46,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.035,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.00088,PPR_3|PF13812.2|7.3e-06,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|2e+03,ECSIT|PF06239.7|0.027,ECSIT|PF06239.7|0.52 R_Transcript_118567:750-1703(+)
MVDARNVYHGLKGQFRPNLQTFNILLSGWKSCEEAEGFFEEMKEMGVKPDVVSYNSLIDVYCKNKELAKAYQVFDKMLEREEGFVPPDVITFTSLIGGLGLAGQPDKARDLLREMKEYGFQPDVAAYNAAIRNFCIAKRLGDADELMDEMVAKGMSPNPTSYNLFFRVFYWSNDLKIAWSLYLRMKVAGCLPNTQSCMFLIRLFRRHEKVEMALELWNDMVDKGFGSYILVSDVLFDLLCDLGKLSEAQECFLQMVGKGQKPSNVSFRRIKVLMELANRHEALKNLSEKMAIFGPPLNVRRPNEDFDDDTSLRTVAR*

Click here to download the sequence:
Link to NCBI Protein BLAST