Transcript Information: R_Transcript_118629.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8310180268056
Replicate 21.1847442241171
Replicate 32.0106227357124
Condition 2: 8 Hour
Replicate 12.3027459198036
Replicate 23.2945499891402
Replicate 31.9915560241804
Condition 3: 24 Hour
Replicate 13.2385621481087
Replicate 21.7284685650923
Replicate 32.4014723010702


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118629.p1 GENE.R_Transcript_118629~~R_Transcript_118629.p1 ORF type:3prime_partial len:319 (+),score=55.20,Transposase_24|PF03004.10|2.9e-14 R_Transcript_118629:623-1576(+)
ATGCTGAGGTGTGGGTGTTGCATATTGTATTCATTGTTGTTTTTTTCTTTCAATGTATCTGACTTATTCAAGACCAATATTTATATGTTTTCTTTAGAAACACCTCAAATGGAGGACAATTCACGTCAAAGTGGAGACGTTCTAAATAACAGAAGTGAGTTAAACTTCCATAGCACGAACTCATCAATGGAAATAGAAACAAATACACCTTCAAATATGGAAGACCAAAGAGCTGGTGGATATAATATGACAAACAAAAGACGACTTCGAGGAATGAAAGAAAGGAATGAAAAAGGTCGTGGATGCAACAGAGTAAAGGCTTTGACCCAACGTGAGTTTGTAGATGTCAATGAAAAGCTTCAACCAATAGGTGAATCTGCGAGGAGGCTATCTTCACACATAGGATGTCTAGTACGGGACCCAAGACGATTGCCTCTTGATTGTACAGATTGGAGAAAGATAGAAAAGCAAAAGTTGGAAGATGTGTGGAATGAAGTCAAGCGTTCATATTTTTTCCCCGAAGGGCGGGAGCCTTATGATTGGGGAATGTTGAAAATGAATGCTTGTTGGAGAGGATATAAGTCAGATCTTAAAGTGGCTCTTTTTGATGGAAAAACCCTTGATGATGCAATTAAGGCAAAGCCAAAGCAAATACCAGATGAGACTTGGATGAATCTGGTGAACTTTTGGAAGTCAGATTTGAGTCAATCAAGGACTAAAAGGAGAATTGAAAATCGAGCAAACTCAAAAATGTGTCACTATGCTGGAACGAAGAGCTTTGCATGTGTGCGTGCTGAAAAAAGGAATATTGTAACTGGTGAGGAACCTAATGAGCTTGATATTTGGTTAGAGACCCATGAACCAAAGAAGGGTTCAAAGCTTGATGATGCTTCGGCTTTGGCAAAGGATACCATTCTTAAGGAGTTAGCTGCCATTCCAGAAGGTACACCTGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118629.p1 GENE.R_Transcript_118629~~R_Transcript_118629.p1 ORF type:3prime_partial len:319 (+),score=55.20,Transposase_24|PF03004.10|2.9e-14 R_Transcript_118629:623-1576(+)
MLRCGCCILYSLLFFSFNVSDLFKTNIYMFSLETPQMEDNSRQSGDVLNNRSELNFHSTNSSMEIETNTPSNMEDQRAGGYNMTNKRRLRGMKERNEKGRGCNRVKALTQREFVDVNEKLQPIGESARRLSSHIGCLVRDPRRLPLDCTDWRKIEKQKLEDVWNEVKRSYFFPEGREPYDWGMLKMNACWRGYKSDLKVALFDGKTLDDAIKAKPKQIPDETWMNLVNFWKSDLSQSRTKRRIENRANSKMCHYAGTKSFACVRAEKRNIVTGEEPNELDIWLETHEPKKGSKLDDASALAKDTILKELAAIPEGTPD

Click here to download the sequence:
Link to NCBI Protein BLAST