Transcript Information: R_Transcript_118633.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1249715738329
Replicate 22.0056167561837
Replicate 31.2991881024684
Condition 2: 8 Hour
Replicate 10.87710561005057
Replicate 20.86773571324004
Replicate 32.0589886673872
Condition 3: 24 Hour
Replicate 11.6447384282534
Replicate 20.98754890554824
Replicate 31.045382910419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118633.p1 GENE.R_Transcript_118633~~R_Transcript_118633.p1 ORF type:3prime_partial len:335 (+),score=50.24 R_Transcript_118633:247-1248(+)
ATGGCATGTAATGGGAAAACAACTTCAAGCAAAGGCAAGATTATTACTCGAGAAATGTTAGCGCAGTTTTTTTCTTCCAGCATGAAAAAGTCAAAGCAAGTACAACTAAGAAATATTGTCCAGAACAATAATCGTGAATCTGCATCTATGGACTCACCTTTCGGAGACTCTTTGAACTCAAAGTCCCAACGAGGAGGACGAGGACGCAATGAGTTGAATTATGAAGATCCAGAATCACTACAAAGGAGTAAAAATGGGCGATCTAGTATGAATGCCCAACATGTTCGACGATCTCTTTTCACCGAAGAAATTGTCTCTACAGAAACACCTCAAATGGAGGACAATTCACGTCAAAGTGGAGACGTTCTAAATAACAGAAGTGAGTTAAACTTCCATAGCACGAACTCATCAATGGAAATAGAAACAAATACACCTTCAAATATGGAAGACCAAAGAGCTGGTGGATATAATATGACAAACAAAAGACGACTTCGAGGAATGAAAGAAAGGAATGAAAAAGGTCGTGGATGCAACAGAGTAAAGGCTTTGACCCAACGTGAGTTTGTAGATGTCAATGAAAAGCTTCAACCAATAGGTGAATCTGCGAGGAGGCTATCTTCACACATAGGATGTCTAGTACGGGACCCAAGACGATTGCCTCTTGATTGTACAGATTGGAGAAAGATAGAAAAGCAAAAGTTGGAAGATGTGTGGAATGAAGTCAAGCGTTCATATTTTTTCCCCGAAGGGCGGGAGCCTTATGATTGGGGAATGTTGAAAATGAATGCTTGTTGGAGAGGATATAAGTCAGATCTTAAAGTGGCTCTTTTTGATGGAAAAACCCTTGATGATGCAATTAAGGCAAAGCCAAAGCAAATACCAGATGAGACTTGGATGAATCTGGTGAACTTTTGGAAGTCAGATTTGAGTCAATCAAGGACTAAAAGGAGAATTGAAAATCGAGCAAACTCAAAAATGTGTCACTATGCTGGAACGAAGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118633.p1 GENE.R_Transcript_118633~~R_Transcript_118633.p1 ORF type:3prime_partial len:335 (+),score=50.24 R_Transcript_118633:247-1248(+)
MACNGKTTSSKGKIITREMLAQFFSSSMKKSKQVQLRNIVQNNNRESASMDSPFGDSLNSKSQRGGRGRNELNYEDPESLQRSKNGRSSMNAQHVRRSLFTEEIVSTETPQMEDNSRQSGDVLNNRSELNFHSTNSSMEIETNTPSNMEDQRAGGYNMTNKRRLRGMKERNEKGRGCNRVKALTQREFVDVNEKLQPIGESARRLSSHIGCLVRDPRRLPLDCTDWRKIEKQKLEDVWNEVKRSYFFPEGREPYDWGMLKMNACWRGYKSDLKVALFDGKTLDDAIKAKPKQIPDETWMNLVNFWKSDLSQSRTKRRIENRANSKMCHYAGTKS

Click here to download the sequence:
Link to NCBI Protein BLAST