Transcript Information: R_Transcript_118691.p1


Annotated TAIR IDAT2G15630.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6814521-6816404 | Forward length=627
E-Value3.3E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8972953896379
Replicate 21.733027970869
Replicate 31.6725554435286
Condition 2: 8 Hour
Replicate 12.176521328644
Replicate 21.9166470149588
Replicate 33.5150738026781
Condition 3: 24 Hour
Replicate 12.5508674697449
Replicate 22.4155759737299
Replicate 32.8488758481358


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118691.p1 GENE.R_Transcript_118691~~R_Transcript_118691.p1 ORF type:complete len:630 (+),score=119.93,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|7.7e-09,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|6.8e-20,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|2.1e-16,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|6e-13,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|7.1e-14,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|4.1e-12,PPR_1|PF12854.3|0.0048,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|2.2e-06,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|7.7e-07,PPR_1|PF12854.3|7.8,PPR|PF01535.16|0.0015,PPR|PF01535.16|5,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e-09,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|0.0016,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|9.5e-06,PPR|PF01535.16|4.7e-12,PPR|PF01535.16|9.4e-08,PPR|PF01535.16|1e-07,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|3.4e-05,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-07,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|9e-05,TPR_10|PF13374.2|1e+04,TPR_10|PF13374.2|3.6e+02,TPR_10|PF13374.2|4.2e+02,TPR_10|PF13374.2|12,TPR_10|PF13374.2|59,TPR_10|PF13374.2|14,TPR_10|PF13374.2|2.9e+02,TPR_10|PF13374.2|2.8e+02,TPR_10|PF13374.2|1.8e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|1.7e+02,ATP13|PF12921.3|2.6,ATP13|PF12921.3|9.5,ATP13|PF12921.3|9.4e+02,ATP13|PF12921.3|19,ATP13|PF12921.3|12,MRP-S27|PF10037.5|27,MRP-S27|PF10037.5|14,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|7.2e+02,MRP-S27|PF10037.5|0.1,MRP-S27|PF10037.5|3.3e+03,TPR_12|PF13424.2|3.5e+02,TPR_12|PF13424.2|1e+04,TPR_12|PF13424.2|25,TPR_12|PF13424.2|17,TPR_12|PF13424.2|10,TPR_11|PF13414.2|1.1e+02,TPR_11|PF13414.2|1.5e+03,TPR_11|PF13414.2|0.78,TPR_11|PF13414.2|2.2e+02,TPR_11|PF13414.2|1.5e+02 R_Transcript_118691:84-1973(+)
ATGAAATCTGCAAAACTCCCACAACACTTGAAATTCTCTTCTCTCTCCTCACCAACTCCTCGTACGAACCCCATTCCACCATCTCTCCCTTCATCCCCATCCAACCCCATTACAATAACCCAAGAAAAGCTACAAACTTCAATCTTGAACTCTCAGTGGCATTTCATCAAACAGGTGGCGGGCACTCTCGAACCTGCCTTGATTTCCTCCACCCTTCTCAATCTCCACTCAAAACCCGATCTTGTTTCCAAATTTGTCGAGCAAATTGAACCCAAATGCCTGAATACAGAATCTTCTTCTCTTGCTCTTGTCATTGTTTCTCGTCTCACGTCCCCAAAACCCGCTTTGCAGCTTGCAAAGCGGGTTATTAGCAGCAGGGTAAGAACAAGCTCTGAACTTTTTAGCAAACTGGGTATTGCCCGTGAGAAATTGGGTGTTGACAGTAGCATTTCTTTTGATTTTTGGATTAGGGGTTTGTGCCAATTGAAGAAAGCTGAGGAAGCTTTCAAGTGTTTTAGGATGATGGTTAAGGATATTGGTATATTGCCTAAAGTTGAAACTTGTAATGATATGTTGAGTTTGTTTCTTAAATTGAATTGTACTCAGATGGCTTGGGTTTTATATGCTGAGATGTTTAAGTTGAGGATTAGTTCTAATACTCATACTTTTAATATTATGGTCAATGTGCTTTGCAAGGAAGGGAAGTTCAAAAGGGCATTGGAGTTTGTAGGGTTTATGGAGATTTCAGGGTTTAAGCCTAATGTTGTGACATATAATACCTTAGTACATGGTTATTGTTGTAAAGGTAAAATCGAGAGTGCGAGAAAGATAATGAGTGAGATGAAGGTTAGAGGGATTTATCCTGATTCATACACGTATGGTTCGATCATAAGTGGTTTGTGTAAGGAGGGGAGGTTTGATGAAGCTGTTGGATTTTTCGATAAAATGGTGGAAAGCGGGTTGGCTCCTACTGCTGTGACTTACAATGCCTTGATTGATGGCTATTGCAATAAGGGGGATTTAGAGAAGGCTTTTGGTTATAGGGATGAGATGGTTAAGAAGGGTATACAACCAACTTTGACGACGTATAATATGCTGATACATTCATTGTTTATGGAGAACAAGGAAGCTATGGCTGATAGCTTGATAAAGGAAATGGAGGAGAAGGGTATGAAGCCAGACAATTTTACCTATAACATTCTTATTAATGGGTACTGCCAAAGTGGAAAAGCAAACGAGGCATTTGGGCTTCTTGATGAGATGTTAGTCAATGGTGTTCGGCCTACAAAGGTTACTTACACATCTCTTATTCATGTGTTAAGTAGAACTAAGAGAATGAGTGAAGCAGCTGATCTATTTGAGAAGGCAAAGCGGAATGGTGTAACTCCTGACCTTGTGATGTTCAATGCCCTTTTAAATGTTTATTGTGCCTGTGGGAACGTTGAGCATGGTTTCTCAATCTTGAGAGAGATGGACAGAAGAAAACTTCGTCCTGATGAAGTCACATACAATACACTGATGCAAGGCCTTTGCAGGGAGGGTAAGGTTGAAGAAGCTCGTAAACTTCTCGATGAGATGAAGGAAAGGGGGATTTCACCTGATCATATCAGTTACAACACACTTATAAGCGGATATAGTAAGAGAGGTGATATGAAAGATGCCTTCAAAGTTCGAGATGAAATGTTTAATATTGGATTCAATCCCACTCGTCTTACTTACAATGCATTAATTCAAGGGTTGTGCAAAAACAAAGAGGGTGCCCTTGCAGAGGAGCTCCTAAAGGAAATGGTTAGTAGAGGAATCCAACCAGATGACAACACCTATATATCTTTGATTGAGGGGATGGGAGATCTTGAAAACCAGAATGAACCAAACCAAACAATGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118691.p1 GENE.R_Transcript_118691~~R_Transcript_118691.p1 ORF type:complete len:630 (+),score=119.93,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|7.7e-09,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|6.8e-20,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|2.1e-16,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|6e-13,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|7.1e-14,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|4.1e-12,PPR_1|PF12854.3|0.0048,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|2.2e-06,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|7.7e-07,PPR_1|PF12854.3|7.8,PPR|PF01535.16|0.0015,PPR|PF01535.16|5,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e-09,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|0.0016,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|9.5e-06,PPR|PF01535.16|4.7e-12,PPR|PF01535.16|9.4e-08,PPR|PF01535.16|1e-07,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|3.4e-05,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-07,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|9e-05,TPR_10|PF13374.2|1e+04,TPR_10|PF13374.2|3.6e+02,TPR_10|PF13374.2|4.2e+02,TPR_10|PF13374.2|12,TPR_10|PF13374.2|59,TPR_10|PF13374.2|14,TPR_10|PF13374.2|2.9e+02,TPR_10|PF13374.2|2.8e+02,TPR_10|PF13374.2|1.8e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|1.7e+02,ATP13|PF12921.3|2.6,ATP13|PF12921.3|9.5,ATP13|PF12921.3|9.4e+02,ATP13|PF12921.3|19,ATP13|PF12921.3|12,MRP-S27|PF10037.5|27,MRP-S27|PF10037.5|14,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|7.2e+02,MRP-S27|PF10037.5|0.1,MRP-S27|PF10037.5|3.3e+03,TPR_12|PF13424.2|3.5e+02,TPR_12|PF13424.2|1e+04,TPR_12|PF13424.2|25,TPR_12|PF13424.2|17,TPR_12|PF13424.2|10,TPR_11|PF13414.2|1.1e+02,TPR_11|PF13414.2|1.5e+03,TPR_11|PF13414.2|0.78,TPR_11|PF13414.2|2.2e+02,TPR_11|PF13414.2|1.5e+02 R_Transcript_118691:84-1973(+)
MKSAKLPQHLKFSSLSSPTPRTNPIPPSLPSSPSNPITITQEKLQTSILNSQWHFIKQVAGTLEPALISSTLLNLHSKPDLVSKFVEQIEPKCLNTESSSLALVIVSRLTSPKPALQLAKRVISSRVRTSSELFSKLGIAREKLGVDSSISFDFWIRGLCQLKKAEEAFKCFRMMVKDIGILPKVETCNDMLSLFLKLNCTQMAWVLYAEMFKLRISSNTHTFNIMVNVLCKEGKFKRALEFVGFMEISGFKPNVVTYNTLVHGYCCKGKIESARKIMSEMKVRGIYPDSYTYGSIISGLCKEGRFDEAVGFFDKMVESGLAPTAVTYNALIDGYCNKGDLEKAFGYRDEMVKKGIQPTLTTYNMLIHSLFMENKEAMADSLIKEMEEKGMKPDNFTYNILINGYCQSGKANEAFGLLDEMLVNGVRPTKVTYTSLIHVLSRTKRMSEAADLFEKAKRNGVTPDLVMFNALLNVYCACGNVEHGFSILREMDRRKLRPDEVTYNTLMQGLCREGKVEEARKLLDEMKERGISPDHISYNTLISGYSKRGDMKDAFKVRDEMFNIGFNPTRLTYNALIQGLCKNKEGALAEELLKEMVSRGIQPDDNTYISLIEGMGDLENQNEPNQTMA*

Click here to download the sequence:
Link to NCBI Protein BLAST