Transcript Information: R_Transcript_1187.p1


Annotated TAIR IDAT5G10020.1
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3133514-3136949 | Forward length=1048
E-Value9.5E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9050833768304
Replicate 23.9332692154521
Replicate 37.131342836538
Condition 2: 8 Hour
Replicate 14.1909768845015
Replicate 24.9422973341704
Replicate 36.6784227754254
Condition 3: 24 Hour
Replicate 16.7450161396759
Replicate 25.7961933742083
Replicate 36.8730932507373


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1187.p1 GENE.R_Transcript_1187~~R_Transcript_1187.p1 ORF type:3prime_partial len:742 (+),score=145.22,LRR_8|PF13855.2|5.8e-06,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|0.042,LRR_8|PF13855.2|5.7e-06,LRR_8|PF13855.2|0.0022,LRR_8|PF13855.2|1.8e-07,LRR_8|PF13855.2|88,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.63,LRR_4|PF12799.3|0.54,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|6.7,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|28,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|4.6,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.9,LRR_1|PF00560.29|11 R_Transcript_1187:205-2427(+)
ATGCTTCAAAACCTCAGTCTTGTGGGCAACCAGTTCACTGGTAGGTTAGTCCCTCAATTGGGTTCAATGTCTAGTTTACAGTACTTGGATCTTTCTGATAACGCCTTCATTGGCCGGATCCCGGACCGGATTCATGATCTTTGGGGTTTACAGTACATGAATTTGTCTAACAACAGGTTTTCTGGGGGTTACCCATCTGGGATTAGGAACCTTCAACAGTTGAGGACTTTGGATATTCATTCTAATGAGCTTTGGGGTGATATTGGGGTGTTCTTTTCTGAGCTTAGGAATGTTGAATTTGTTGATTTAAGCTCTAATAATTTCACTGGTGAGCTGCCTGGTGACCCCTTGAATGTTTCTAGTTTAGGGAATACTGTTAGGCATCTGAATTTGAGTAGGAATTTGTTGAGTGGAAGGTTTTTGAGTAATGATACTTTGCAATTGTTTAAGAGCTTGGAGGTTTTGGATTTGGGAGATAATAGGATTGGTGGTGAGCTCCCCAAGTTTGGAGCTTTGTTCAATTTGAAGGTCTTGCGCCTCCCTAATAACCAGTTGTATGGAGAAATCCCTCATGAGTTGCTCACGAGTTCGCTTCCGTTGATGGAGTTGGATCTGAGTGGAAATGGGTTTTCTGGTTTGATTCGTGGTATCAACTCCACAACTTTGGAGATCCTTGATTTGAGTTCGAACAGATTGACAGGTAGCTTTCCAGAATTCAGCTCTCAATCAGGGTTGACAGCACTGAGAATCAGTAATAACTCTTTAGATGGTGGCTTGCCCTCTGAATGGCTTCAGCTACCTAGACTGTCCAAGATTGATCTGAGTATCAACAACTTTAGTGGGCCTATTCCGCCTGCTCTATTTTCAATGAAATTGGTAAACTTAAATCTTTCTCAAAACAATTTCAATGGAGAAATCCCCTTCCCAAAATCGAAGGTCAGTGAATTCCTGGTTCAGCCGGTTTATGCACCTTTGGAGTCCTTGGACCTTTCTGAAAATTCACTGACGGGAGGCCTGTCATCAGAGATAGGGTCCATGGGCGGGCTTAAAGTCCTGAATCTGGCAAAGAATGGTTTATCAGGACATGTACCGAGTTCATTGGCCAATATTCGTGGATTGGAGTCTCTTGATTTGTCAAACAATCATTTTAACGGCCATTTGCCTGACAAGATTCCTTCAAGTCTGACATCATTGAATGTGACCTATAATGATCTATCAGGTACTGTCCCAGAAAGCTTAAGAAAATTCTCGCCAAGTTCGTTTCATCCTGGAAATGAGAAGCTAGTTATTCCAGGCGGTCAAGGATCAGCAAATACTAGTCCAGGTTCTATATCCGATGGGGGCAAACACCACGGTTCAAAGTCTAGTATTAGAATTGCGATCATTCTTGCTGCTATTGGAGCTGCTTGCATGATTGCATTTGTATCAATTGCTTATTATCGTGCTCAAATTCATGGGTTCCATGGAAGAAGCAAGTTCAATGATGCGACAACTGAGAGGGATGTTAAAGCGGGCAGATTTGCTGGGCCATCTCTATTCAAATTCCATGCAACCTCAGAGCCTACACAATCTTCTCTGAGTTTTTCAAATGATCATTTATTAAACTCAAATTCAAGGTCATTGTCAGGACAGGCTGCACTCGTGCCGGAAATAGTGGAGCATGCACCCGAGACAGTCACAACTAGTGTTTCCAATATGAAGCCCAATCTTCCTGTCAATCCAATTGTAACATCAGCACGGAAGTCTCCCCCAGGCTCACCATTTTCATCTTCTCCCAGATTTGTTGAGACATCTGAACAACCTTTAACATTGGATGTCTATTCACCTGATCGATTTGCTGGAGAGCTGTATTTCCTTGATGCATCACTTTCATTCACATCTGAGCAGTTATCAAGAGCTCCAGCTGAAGTTCTTGGTCGAAGCAGTCATGGTACATTGTACAAGGCTACACTAAATGGTGGACAAATGTTGACTGTGAAGTGGCTGAGGGTGGGATTGGTCAAAAACAAGAAAGACTTTGCAAAGGAAGTTAAAAAGATTGGTTGTCTGAGGCATCCAAATATAGTACCAGTACGGGCTTATTACTGGGGGCCAAGAGAACAAGAAAGGCTTATTTTATCGGATTATATCCCGGGGGACAGCTTGGCCCTGCACCTTTGTGAATCAACACCACGAAGATACTCTCCTTTGCCATTCAGCAACAGACTGAGAGTTGCTGTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1187.p1 GENE.R_Transcript_1187~~R_Transcript_1187.p1 ORF type:3prime_partial len:742 (+),score=145.22,LRR_8|PF13855.2|5.8e-06,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|0.042,LRR_8|PF13855.2|5.7e-06,LRR_8|PF13855.2|0.0022,LRR_8|PF13855.2|1.8e-07,LRR_8|PF13855.2|88,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.63,LRR_4|PF12799.3|0.54,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|6.7,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|28,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|4.6,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.9,LRR_1|PF00560.29|11 R_Transcript_1187:205-2427(+)
MLQNLSLVGNQFTGRLVPQLGSMSSLQYLDLSDNAFIGRIPDRIHDLWGLQYMNLSNNRFSGGYPSGIRNLQQLRTLDIHSNELWGDIGVFFSELRNVEFVDLSSNNFTGELPGDPLNVSSLGNTVRHLNLSRNLLSGRFLSNDTLQLFKSLEVLDLGDNRIGGELPKFGALFNLKVLRLPNNQLYGEIPHELLTSSLPLMELDLSGNGFSGLIRGINSTTLEILDLSSNRLTGSFPEFSSQSGLTALRISNNSLDGGLPSEWLQLPRLSKIDLSINNFSGPIPPALFSMKLVNLNLSQNNFNGEIPFPKSKVSEFLVQPVYAPLESLDLSENSLTGGLSSEIGSMGGLKVLNLAKNGLSGHVPSSLANIRGLESLDLSNNHFNGHLPDKIPSSLTSLNVTYNDLSGTVPESLRKFSPSSFHPGNEKLVIPGGQGSANTSPGSISDGGKHHGSKSSIRIAIILAAIGAACMIAFVSIAYYRAQIHGFHGRSKFNDATTERDVKAGRFAGPSLFKFHATSEPTQSSLSFSNDHLLNSNSRSLSGQAALVPEIVEHAPETVTTSVSNMKPNLPVNPIVTSARKSPPGSPFSSSPRFVETSEQPLTLDVYSPDRFAGELYFLDASLSFTSEQLSRAPAEVLGRSSHGTLYKATLNGGQMLTVKWLRVGLVKNKKDFAKEVKKIGCLRHPNIVPVRAYYWGPREQERLILSDYIPGDSLALHLCESTPRRYSPLPFSNRLRVAVD

Click here to download the sequence:
Link to NCBI Protein BLAST