Transcript Information: R_Transcript_118730.p1


Annotated TAIR IDAT5G18620.2
Annotated Gene Namechromatin remodeling factor17
Annotated Gene Symbol(s)CHR17
Annotation TypeOrtholog
Chromosome Positionchr5:6196190-6202058 | Reverse length=1072
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.99363420028
Replicate 221.218804563292
Replicate 324.407371658328
Condition 2: 8 Hour
Replicate 126.891990404489
Replicate 230.654657861279
Replicate 337.055166574759
Condition 3: 24 Hour
Replicate 136.493624205888
Replicate 226.899766623768
Replicate 339.811162282141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118730.p1 GENE.R_Transcript_118730~~R_Transcript_118730.p1 ORF type:5prime_partial len:1038 (+),score=294.51,SNF2_N|PF00176.19|1.6e-72,SNF2_N|PF00176.19|1.3e+03,SLIDE|PF09111.6|4.5e+02,SLIDE|PF09111.6|5.1e+03,SLIDE|PF09111.6|6e-45,Helicase_C|PF00271.27|2.4e-19,ResIII|PF04851.11|4.1e+03,ResIII|PF04851.11|1.5e-07,HAND|PF09110.7|4e+03,HAND|PF09110.7|1.6e+04,HAND|PF09110.7|3e-07,HAND|PF09110.7|1.3e+04 R_Transcript_118730:1-3114(+)
GGGGAAGAAGACGATGATGAGGAACTCGAAGCCGTTGCTCGACCTGCTGATTCTGATGAAGAAGATGCCGATAATGATGGTGATGGTGGTGATGAAGACGGAGATGATGATGAGGATCGGAATACTGGATATGATAATGAAATTTCAAAGCGTGAAAGGGCAAGGTTGAAAGAAATGCAGAAGATGAAGAAGCAGAAGATTCAGGAAATATTGGATAAGCAAAATGCAGCTATTGATGCTGATATGAATAACAAGGGCAAGGGGCGATTGAACTACCTTCTTCAGCAAACAGAGATATTTGCACATTTTGCTAAAGGGAGTGATCAAGCTCTAGCACAAAAAAAGGCAAAGGGAAGGGGCCGGCATGCATCAAAGGTGACTGAAGAAGAAGAAGATGAAGAATATCTTAAAGAGGAAGAAGCTGGGACTGCCAACACAAGGCTGGTTACTCAGCCTTCTTGTATCCAGGGAAAGATGAGAGACTATCAGCTTGCTGGGCTGAATTGGCTCATTCGGCTTTATGAGAATGGTATAAATGGAATCCTTGCTGATGAAATGGGTCTTGGAAAAACTTTGCAAACCATTTCATTATTGGGCTATCTCCATGAGTTCAGAGGAATTACTGGGCCACACATGGTTGTTGCTCCAAAATCAACCCTTGGCAACTGGATGAATGAAATAAAACGATTTTGTCCTGTTTTGCGTGCTGTAAAATTCCTTGGAAATCCAGAGGAAAGGAGACATATACGTGAGGATCTGTTGGTTGCTGGAAAATTTGATGTTTGTGTCACTAGTTTTGAAATGGCGATCAAAGAGAAGTCGGCGTTGCGTCGCTTTAGCTGGCGATATATTATTATTGATGAAGCTCATCGAATTAAAAATGAAAACTCTCTGCTTTCAAAAACCATGAGGCTTTATAATACCAACTATCGTCTGCTCATCACTGGAACTCCTCTTCAGAATAATCTCCATGAATTATGGTCGCTTCTCAACTTCTTATTGCCAGAAATTTTTAGCTCAGCAGAAACATTTGATGAATGGTTTCAAATTTCTGGTGACAATGACCAGCAGGAGGTTGTTCAACAACTACATAAGGTCCTGCGACCTTTTCTTCTTCGTAGGTTGAAGTCAGATGTTGAGAAAGGCTTGCCCCCCAAAAAGGAAACGATACTTAAAGTGGGGATGTCTCAGATGCAAAAGCAGTACTACAGAGCTCTTCTGCAGAAGGATCTTGAAGTTGTTAATGCTGGTGGAGAGCGTAAGCGCCTTCTAAACATAGCTATGCAGTTGCGTAAATGCTGTAATCACCCATATCTATTCCAAGGTGCAGAACCTGGCCCACCCTACACCACTGGAGAACATCTTATTACCAATGCTGGAAAAATGGTCTTGCTTGACAAGTTGCTTCCCAAACTGAAGGAGCGTGGTTCCAGGGTTCTAATATTTTCACAGATGACAAGGCTGCTCGATATTCTTGAGGACTATCTTATGTTTCGTGGTCATCAGTACTGTCGTATTGATGGTAATACTGGCGGTGAAGATCGCGATGCTTCCATTGATGTCTTCAACAAGCCAGGAAGTGAGAAGTTTGTTTTCTTACTATCAACAAGAGCTGGAGGCCTTGGCATCAATCTTGCGACTGCAGATATTGTCATCCTTTATGACAGTGACTGGAATCCGCAAGTTGATTTGCAAGCACAGGACAGAGCTCATCGAATTGGTCAAAAGAAGGAAGTTCAAGTTTTTCGTTTCTGTACTGAGTATACTATTGAGGAAAAAGTGATTGAAAGAGCTTATAAGAAACTTGCACTTGATGCTTTGGTTATTCAACAAGGACGATTAGCTGAGCAAAAAACTGTGAACAAGGACGAGTTGTTGCAGATGGTGAGATTTGGTGCTGAAATGGTATTTAGCTCTGGGGATAGTACAATTACAGATGAAGATATAGATCGAATCATTGCCAAGGGAGAAGAGGCAACTGCTGAACTTGATGCAAAGATGAAGAAATTCACCGAGGATGCTATCAAGTTTAAAATGGATGACACTGCTGATCTGTATGACTTCGATGATGAGAAGAAGGATGAGAACAAGGTTGACTTCAAGAAACTTGTGAGTGACAACTGGATTGAACCGCCAAAGCGAGAGAGGAAGCGCAATTATTCAGAGTCGGAGTATTTTAAGCAGACAATGCGTCAAAGTGGTCCGGCTAGACCTAAAGAGCCTCGTATTCCTCGTATGCCTCAGTTGCATGATTTCCAGTTTTTCAACACTCAAAGGCTAAATGAACTTTATGAGAAGGAAGTGCGTCATCTCATGCAAACACATCAGAAAAACCAGATGAAAGACACAATAGAAGTTGATGAACCAGATGAAATGACAGATCCTCCACTCACTGCTGAAGAGCAAGAGGAAAAGGAGCGTTTGTTGGAAGAGGGGTTCTCAACTTGGACAAGGAGAGATTTCAATACTTTCATCAGAGCTTGTGAGAAGTATGGTAGGAATGACATTAAGAGCATAGCTGCTGAGATGGAAGGGAAAATGTTTGAGGAAGTTGAAAGATATGCTAAAGTCTTCAAGGAGAGATACAAGGAGTTAAATGATTATGATAGGATCATTAAGAACATCGAAAGAGGGGAAGCTAGAATTTCCAGAAAAGATGAGATAATGAAAGCAATTGGAAAGAAACTAGATCGTTACAAGAACCCATGGTTGGAGTTGAAGATCCAGTATGGTCAGAACAAAGGGAAGCTATACAATGAAGAGTGTGATCGCTTCATGATCTGCATGGTTCACAAACTCGGTTATGGAAATTGGGATGAGCTTAAGGCTGCTTTCCGAACATCACCATTGTTCCGTTTTGATTGGTTTGTTAAATCCCGCACTACGCAAGAATTGGCTAGGAGGTGTGATACTCTCATTAGGCTAGTAGAGAGAGAGAATCAGGAGTATGACGAAAGGGAGAGACAGGCACGCAAAGAGAAGAAGCTTGCTAAGAATGCCACACCTTCAAAGCGCGGTGCAGCTCGTCAGCAAGCTGAAAGCCCCACTTCCTTGAAGAAACGAAAGCAGTTAACAATGGATGACTACGGTGGCTCAGGGAAGAGGAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118730.p1 GENE.R_Transcript_118730~~R_Transcript_118730.p1 ORF type:5prime_partial len:1038 (+),score=294.51,SNF2_N|PF00176.19|1.6e-72,SNF2_N|PF00176.19|1.3e+03,SLIDE|PF09111.6|4.5e+02,SLIDE|PF09111.6|5.1e+03,SLIDE|PF09111.6|6e-45,Helicase_C|PF00271.27|2.4e-19,ResIII|PF04851.11|4.1e+03,ResIII|PF04851.11|1.5e-07,HAND|PF09110.7|4e+03,HAND|PF09110.7|1.6e+04,HAND|PF09110.7|3e-07,HAND|PF09110.7|1.3e+04 R_Transcript_118730:1-3114(+)
GEEDDDEELEAVARPADSDEEDADNDGDGGDEDGDDDEDRNTGYDNEISKRERARLKEMQKMKKQKIQEILDKQNAAIDADMNNKGKGRLNYLLQQTEIFAHFAKGSDQALAQKKAKGRGRHASKVTEEEEDEEYLKEEEAGTANTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIKRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLITNAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMFRGHQYCRIDGNTGGEDRDASIDVFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSGDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTADLYDFDDEKKDENKVDFKKLVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQLHDFQFFNTQRLNELYEKEVRHLMQTHQKNQMKDTIEVDEPDEMTDPPLTAEEQEEKERLLEEGFSTWTRRDFNTFIRACEKYGRNDIKSIAAEMEGKMFEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEYDERERQARKEKKLAKNATPSKRGAARQQAESPTSLKKRKQLTMDDYGGSGKRRK*

Click here to download the sequence:
Link to NCBI Protein BLAST