Transcript Information: R_Transcript_118786.p1


Annotated TAIR IDAT3G25900.1
Annotated Gene NameHomocysteine S-methyltransferase family protein
Annotated Gene Symbol(s)HMT-1, ATHMT-1
Annotation TypeOrtholog
Chromosome Positionchr3:9480964-9482684 | Forward length=326
E-Value1.3E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9183843095603
Replicate 24.4537606943663
Replicate 35.4143197954542
Condition 2: 8 Hour
Replicate 15.193971352446
Replicate 23.1847316561689
Replicate 34.8404294987699
Condition 3: 24 Hour
Replicate 17.0960495067449
Replicate 26.4160753136225
Replicate 36.367332272552


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118786.p1 GENE.R_Transcript_118786~~R_Transcript_118786.p1 ORF type:complete len:330 (+),score=79.71,S-methyl_trans|PF02574.12|1.8e-66 R_Transcript_118786:354-1343(+)
ATGGGTATTGAAAAGGCAACAGCAATGTTGGAAGAAATGATAGAAAAGGCAGGAGGATGTGGTGTTGTTGATGGTGGATTGGCTACCCAGCTTGAGAAACATGGTGCCTCCATTAATGACCCTCTTTGGAGTGCCCTTTGCTTAGTCAAAGACCCCCATCTAATCAAACAGGTGCACTTGGAATATCTGGAGGCAGGTGCAGATGTTTTGATTACTTCATCTTATCAGGCCACCCTTCCAGGGTTTTTGTCGAGAGGGCTGTCAATGCAAGAAGCAGAGTTGTTGCTAGAGAAGAGTGTCAGATTGGCTATTGAAGCCCGTGATCAGTTCTGGAATTCAGTTGGCAAAATCACTGACAGTGGTTATAATAGGGCCCTTGTTGCAGCATCTGTTGGAAGCTATGGAGCATACCTTGCTGATGGATCAGAATATAGTGGAATTTACGGAGAAGATGTTGGCCTGTCTAAGTTAAAGGATTTCCATAGGCGTAGACTACAAGTTCTAGCAGGAGCTAGTCCAGATTTGATAGCATTTGAGACAATTCCGAATAAACTCGAAACTCAGGCCATTGTTGAACTGCTCGAGGAAGAAAATATACAGATTCCATCCTGGATATGCTTTAGCTCTGTAGATGGTGAGCATGCTCCATCAGGGGAAAGCTTTAAAGAATGCCTTGACGTAATTAACAAAAGCAAGAAAGTTGCCATGACAGGAATAAATTGTGCACCACCCCACTTTGTTGAGGATCTAATTCGCAAATTCAAGAAGTTGACAGACAAGGCAATAGTAGTGTATCCTAATAGTGGCGAGATATGGGATGGAAGAGCTAAAAAGTGGCTGCCATCTCAGTGCTCTGATGATGATGCTCTTGAGTCATTAGCGTCAAGATGGCGCAATTCACGTGCCAAACTGATTGGGGGATGTTGCAGGACAACACCTTCAACTATTCAGGGCATTTGCAAAGCTATAAAGAGGAGACCTTCTATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118786.p1 GENE.R_Transcript_118786~~R_Transcript_118786.p1 ORF type:complete len:330 (+),score=79.71,S-methyl_trans|PF02574.12|1.8e-66 R_Transcript_118786:354-1343(+)
MGIEKATAMLEEMIEKAGGCGVVDGGLATQLEKHGASINDPLWSALCLVKDPHLIKQVHLEYLEAGADVLITSSYQATLPGFLSRGLSMQEAELLLEKSVRLAIEARDQFWNSVGKITDSGYNRALVAASVGSYGAYLADGSEYSGIYGEDVGLSKLKDFHRRRLQVLAGASPDLIAFETIPNKLETQAIVELLEEENIQIPSWICFSSVDGEHAPSGESFKECLDVINKSKKVAMTGINCAPPHFVEDLIRKFKKLTDKAIVVYPNSGEIWDGRAKKWLPSQCSDDDALESLASRWRNSRAKLIGGCCRTTPSTIQGICKAIKRRPSI*

Click here to download the sequence:
Link to NCBI Protein BLAST