Transcript Information: R_Transcript_118798.p1


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16444108968215
Replicate 20.094577929803144
Replicate 30.10318350268537
Condition 2: 8 Hour
Replicate 10
Replicate 20.10072469297831
Replicate 30.081764011803545
Condition 3: 24 Hour
Replicate 10
Replicate 20.099348013020618
Replicate 30.098593264355393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118798.p1 GENE.R_Transcript_118798~~R_Transcript_118798.p1 ORF type:5prime_partial len:222 (-),score=44.30,zf-CCHC|PF00098.19|0.00054,zf-CCHC|PF00098.19|2.2e-05 R_Transcript_118798:219-884(-)
GGCTACATACTCTCCGACCACGACTCAAAAGAAGTCTTAATCACTCCATCTTCATATGAGTCTAGGACTATCCGAGAAGGGGACCGGGTCCAATTCCGGGTCTTGGAGAGGAACTCAACCCCCAGTTACAAGGCAACTGATGTGATCCGGTATGGGCCCCAGTGCTATTCCTGTTCTAGGTTTGGTCATTTTGCTAATCGTTGCCCTCAAAGAAGGAATCTTGATTCTCATAAGTGTTATAGGTGTGGGTTAAAGGGTCATTATGCTAGGGATTGTAAGTCACCTCATTTCATGAATTCTGGGTTTTTGAATCTTAATACTAGTAGTAGTATTAATGGTGGTGGAAAAAAGGGGTCTTTTGTTTGTGTGAAAAGGAGGGAGGATGTTAAGAAAGTTGAGCAGGTTGAGGATTGTTTTATTCTCGACTTTGATCCTTATGATACTCTCAGTGATGATGACGACGACGATGAGGAGGACGATGATGATGATGATGATTGTAGAGAAATAGGGTCAATAGTGTGTGTAAAGAGAATGGAAGATGTGAAGAAAGTAGAGGAAGCGGAGGACTGTTTCATATTGGAGTTTTTTTTTTTTGGTGCTGATGAGAGGATATACCCCAAGACAACTGATGTTTCATATTGGAGTTTGATCCTAGTGACCCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118798.p1 GENE.R_Transcript_118798~~R_Transcript_118798.p1 ORF type:5prime_partial len:222 (-),score=44.30,zf-CCHC|PF00098.19|0.00054,zf-CCHC|PF00098.19|2.2e-05 R_Transcript_118798:219-884(-)
GYILSDHDSKEVLITPSSYESRTIREGDRVQFRVLERNSTPSYKATDVIRYGPQCYSCSRFGHFANRCPQRRNLDSHKCYRCGLKGHYARDCKSPHFMNSGFLNLNTSSSINGGGKKGSFVCVKRREDVKKVEQVEDCFILDFDPYDTLSDDDDDDEEDDDDDDDCREIGSIVCVKRMEDVKKVEEAEDCFILEFFFFGADERIYPKTTDVSYWSLILVTL*

Click here to download the sequence:
Link to NCBI Protein BLAST