Transcript Information: R_Transcript_118849.p1


Annotated TAIR IDAT4G05320.2
Annotated Gene Namepolyubiquitin 10
Annotated Gene Symbol(s)UBQ10
Annotation TypeOrtholog
Chromosome Positionchr4:2718559-2719932 | Forward length=457
E-Value1.2E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77782504068404
Replicate 20.77543154946555
Replicate 30.065075959079979
Condition 2: 8 Hour
Replicate 10
Replicate 20.38115139502021
Replicate 30.2578353781305
Condition 3: 24 Hour
Replicate 10.39132625956314
Replicate 20.50125588387676
Replicate 30.37308587534484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118849.p1 GENE.R_Transcript_118849~~R_Transcript_118849.p1 ORF type:internal len:352 (+),score=69.63,ubiquitin|PF00240.19|3.4e-18,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,Rad60-SLD|PF11976.4|2e-07,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Ubiquitin_2|PF14560.2|46,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Rad60-SLD_2|PF13881.2|1.1,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.23,DUF2407|PF10302.5|39,DUF2407|PF10302.5|0.97,DUF2407|PF10302.5|0.94,DUF2407|PF10302.5|1.1,DUF2407|PF10302.5|2.3,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|12,2_5_RNA_ligase2|PF13563.2|6.9,2_5_RNA_ligase2|PF13563.2|7,2_5_RNA_ligase2|PF13563.2|6.9,2_5_RNA_ligase2|PF13563.2|8.7,DUF3861|PF12977.3|9,DUF3861|PF12977.3|8.6,DUF3861|PF12977.3|8.6,DUF3861|PF12977.3|8.9,DUF969|PF06149.8|35,DUF969|PF06149.8|17,DUF969|PF06149.8|17,DUF969|PF06149.8|17,DUF969|PF06149.8|61 R_Transcript_118849:1-1053(+)
GACAAAGAAGGTATTCCCCCAGATCAACAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGACGAACTTTGGCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTACTCCGATTAAGAGGAGGAATGCAAATCTTCGTGAAAACTTTAACTGGAAAGACCATCACCCTTGAAGTTGAAGGCTCTGACTCCATTCAACAAGTCAAACAAAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAACAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGACGAACTTTGGCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTCTTACGATTAAGAGGAGGAATGCAAATTTTCGTGAAAACTTTAACTGGAAAGACCATCACCCTTGAAGTTGAAGGCTCTGACTCCATTCAACAAGTCAAACAAAAGATTCAGGACAAAGAAGGTATTCCCCCAGATCAACAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGACGAACTTTGGCTGACTACAACATCCAAAAGGAATCCACCCTCCATTTAGTACTCCGATTAAGAGGAGGAATGCAAATCTTCGTGAAAACTTTAACTGGAAAGACCATCACCCTTGAAGTTGAAGGCTCTGACTCCATCCAACAAGTGAAACAAAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGACGAACTTTGGCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTCTTACGATTAAGAGGAGGAATGCAAATCTTCGTGAAAACTTTAACTGGAAAGACCATCACCCTTGAAGTTGAAGGCTCTGACTCCATCCAACAAGTGAAACAAAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGACGAACTTTGGCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTACTCCGATTAAGAGGAGGAATGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118849.p1 GENE.R_Transcript_118849~~R_Transcript_118849.p1 ORF type:internal len:352 (+),score=69.63,ubiquitin|PF00240.19|3.4e-18,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,ubiquitin|PF00240.19|1.9e-31,Rad60-SLD|PF11976.4|2e-07,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Rad60-SLD|PF11976.4|5.5e-15,Ubiquitin_2|PF14560.2|46,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Ubiquitin_2|PF14560.2|0.00092,Rad60-SLD_2|PF13881.2|1.1,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.22,Rad60-SLD_2|PF13881.2|0.23,DUF2407|PF10302.5|39,DUF2407|PF10302.5|0.97,DUF2407|PF10302.5|0.94,DUF2407|PF10302.5|1.1,DUF2407|PF10302.5|2.3,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|12,2_5_RNA_ligase2|PF13563.2|6.9,2_5_RNA_ligase2|PF13563.2|7,2_5_RNA_ligase2|PF13563.2|6.9,2_5_RNA_ligase2|PF13563.2|8.7,DUF3861|PF12977.3|9,DUF3861|PF12977.3|8.6,DUF3861|PF12977.3|8.6,DUF3861|PF12977.3|8.9,DUF969|PF06149.8|35,DUF969|PF06149.8|17,DUF969|PF06149.8|17,DUF969|PF06149.8|17,DUF969|PF06149.8|61 R_Transcript_118849:1-1053(+)
DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDSIQQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDSIQQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDSIQQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDSIQQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ

Click here to download the sequence:
Link to NCBI Protein BLAST