Transcript Information: R_Transcript_118853.p1


Annotated TAIR IDAT3G62250.1
Annotated Gene Nameubiquitin 5
Annotated Gene Symbol(s)UBQ5
Annotation TypeOrtholog
Chromosome Positionchr3:23037138-23037611 | Forward length=157
E-Value4.6E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3899526346792
Replicate 23.8537513422319
Replicate 31.7397522224926
Condition 2: 8 Hour
Replicate 10.4649214863401
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_118853.p1 GENE.R_Transcript_118853~~R_Transcript_118853.p1 ORF type:5prime_partial len:158 (+),score=28.41,ubiquitin|PF00240.19|2.1e-32,ubiquitin|PF00240.19|2.5e+02,Ribosomal_S27|PF01599.15|7.3e+03,Ribosomal_S27|PF01599.15|1e-22,Rad60-SLD|PF11976.4|3.4e-16,Rad60-SLD|PF11976.4|1.2e+03 R_Transcript_118853:3-476(+)
GCTATGCAAATTTTTGTTAAAACTTTGACGGGTAAGACCATTACCCTCGAGGTGGAAGGCTCAGATAGCATCCAAAATGTTAAGCAAAAAATCCAAGATAAGGAGGGTATCCCACCAGATCAACAAAGATTGATCTTTGCAGGAAAGCAATTGGAAGACAACAGAACTCTTGCAGACTACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTTTGAGACTCAGAGGAGGAAAGCAAAAAAAGAGAAAAAAAAAAGACTACAAAACCCCAAAGAAGCTTAAAAAGAAAAGAAAAAAAAAAAAATTTGCAGTCCTTGACCACTATAAGATTGAAAAGGATGGAACCGTGAAGAGAGTCAAGAGACAATGCCCATCTGATGAATGTGGTCCTGGAGTTTACATGGCAGCTCACAAAGATCGTCAATACTGTGGAAAATGCGGACTTACTTTCAGATTTAAGACTAATGAAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_118853.p1 GENE.R_Transcript_118853~~R_Transcript_118853.p1 ORF type:5prime_partial len:158 (+),score=28.41,ubiquitin|PF00240.19|2.1e-32,ubiquitin|PF00240.19|2.5e+02,Ribosomal_S27|PF01599.15|7.3e+03,Ribosomal_S27|PF01599.15|1e-22,Rad60-SLD|PF11976.4|3.4e-16,Rad60-SLD|PF11976.4|1.2e+03 R_Transcript_118853:3-476(+)
AMQIFVKTLTGKTITLEVEGSDSIQNVKQKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGKQKKRKKKDYKTPKKLKKKRKKKKFAVLDHYKIEKDGTVKRVKRQCPSDECGPGVYMAAHKDRQYCGKCGLTFRFKTNEK*

Click here to download the sequence:
Link to NCBI Protein BLAST