Transcript Information: R_Transcript_119054.p1


Annotated TAIR IDAT5G39710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2745
Annotation TypeOrtholog
Chromosome Positionchr5:15895729-15897972 | Forward length=747
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5592775941801
Replicate 20.69432210371356
Replicate 31.5755957076719
Condition 2: 8 Hour
Replicate 11.1659935689164
Replicate 21.4197385295991
Replicate 32.9532382358566
Condition 3: 24 Hour
Replicate 12.0649879516982
Replicate 21.6337228807835
Replicate 32.1134952938406


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119054.p1 GENE.R_Transcript_119054~~R_Transcript_119054.p1 ORF type:5prime_partial len:756 (+),score=119.90,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|7.8e-18,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|1.5e-19,PPR_2|PF13041.2|6.9e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|7e-18,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|11,PPR_1|PF12854.3|19,PPR_1|PF12854.3|3.6e-11,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|2.6e-13,PPR_1|PF12854.3|9.6e-13,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.2e-14,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|8.1e-13,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|2.3e+02,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|3.4e-08,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3e-08,PPR|PF01535.16|0.0043,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|0.00031,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|29,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|2.6e-06,PPR_3|PF13812.2|5.5e-05,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|70,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|14,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|0.48,MRP-S27|PF10037.5|2.6,MRP-S27|PF10037.5|1.1e+03,ATP13|PF12921.3|5.3e+02,ATP13|PF12921.3|0.38,ATP13|PF12921.3|67,ATP13|PF12921.3|95,ATP13|PF12921.3|47,ATP13|PF12921.3|7.2,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|2.9e+03,AEP1|PF17049.1|19,AEP1|PF17049.1|49,AEP1|PF17049.1|1.3,AEP1|PF17049.1|16 R_Transcript_119054:1-2268(+)
GCACACACTAACATGAGAATTCACAAGTACTACCACCATTACCATTCTCTCTCCTCCCAATCTCACGACGCATCTCTGGCAGACAAAGCCATAACCTACCTTCGTCGCCACCCTCACCAACTCCCTTCTCTCTTCTCCCAATTCTCTCCCACCGCCACTTCCTTTCTTCTCCTCAAATCCCAATTCGACCAAACCCTAATCCTCAAATTCCTCGATTTCGCTCGTTCCCGCCCTTTCTTCGACCCCAAATCCAAATGTTTCTCTCTCCACATCCTCACCAATTTCAAGCTCTACAAAACCGCCCAATCCATCGCCCAAGATCTCGCAAAAGAACTCGCCGCCGTTGATAAGAACGGCCAATTGGTGTTCGGTTATCTCAAGGACTCTTATCAGACCTTCAATTCGAGCTCTGCTGTCTTCGATTTGATGGTAAAATCGTATTCTAATTTGATGATGATTGATAAGGGTTTGAACACTATTTATTTAGCTAGAGATCATGGGTTTATGCCTGGTGTTTTGTCTTATAATGCTGTTATTGATGCTATTATTAGGTCTCAGGGTTCAATTGATCAGGTTGAGAAGTTGTTTTGTGAGATGAGAGAGATTGGGGTTTCTCCTAATGTGTTTACTTATAATATTTTAATTAGAGGGTTTTGTGGGGCGGGGGAGTTGCGTAAGGGTTTAGGGTTTTTTAGGGAAATGGAGAGGAATGGGTGTTTGCCTAATGTGGTTTCTTATAATACTCTTATGGATGCTTATTTTAAAGTAGGTAAGAGTAATGAGGCGATGAAGTTGTTTGATTCAATGAGGTCGAAATCTATGGATCCTAACTTGATTACGTATAATGTGATGGTTAATGGGTTGTGTCGAGAGGGGAGGATGAAGGAGGCGAGTGAGTTGGTTGATGAGATGTATTGGAAGGGCCTTAAACCAGATGAGGTGACGTTTAATACTCTTGTGAATGGTTATTGTAAGGAGGGTAACTTTCACCAAGCTCTTGTTATGCATTCGGAGATGGTAAAGAATGGTTTGTCGCCTAATGTTGTTACTTACACGTCGTTGATTAATAGCATGTGCAAGGCTGGGAATTTGAATCGTGCGATGGAGTTTTTGGATAAAATGCGTAATAGAGGGCTTGAACCCAATGAAAGAACCTATACGACATTGATTGATGGGTTTTGTCAACAGGGTTTGATGAATGAAGCTTATCGTTTATTGAATGAAATGATGGAGAGTGGATTTGTACCTTCTATTGTGACCTACAATGCCCTCATTCATGGCCATTGTGTTATGGGTAGGATGAAGGAAGCTATGGGCATAATTCAGGAAATGACTGAGAGAGGGTTGACACCAGATTTAGTGAGTTATAGCACTATAATATCTGGGTTCTGCAAGAACCACGATTTGGAACGGGCATTTTGGATGAAGCAGGAGATGGTCGGAAGGGGTATCTTCCCAGATGCTGTTACCTATTCATCGCTTATAAAGGGACTTTGTGAGCAGAATGAGCTTGCTGAAGCCTGTGCCCTATTTGAAGAGATGCTACAGGTGGGCTTGTCGCCTGATGAAGTCACATACACAACACTTATAAATGCCTTCTGTGCAGAAGGGAATGTCAAGCAGGCTTTTCATCTGCACGATGAGATGATACAGAAGGGTTTCCTTCCTGATGCAGTCACATACAATGTGCTTATTAATGGACTAAACAAACAAGCTCGGACAAAGGAAGCAAAGAGGCTTTTGCTCAAAATGTTTTACGACGATTCTGTTCCAACTAGCATCACATACGATACACTGATAGAGAGTTGTACGGACATAGAATTTAAGACTGCTGTGGCTCTTTTGAAGGGATTTTGCATGAAAGGTTTGATGACTGAAGCAGATAGACTCTTTGAGTCAATGCTTCAGAAAGGTCATAAGCCTACAGAGGCAGCTTATAATGTCCTCATTCATGGTCATTCCAAGTGTGGGAACTTGGTCAAGGCATATAAGCTATACAAGGAAATGGTGCATTCTGGTTTCATTCCTCATACTGTCACTGTCATTGCTTTAATTAAAGCACTTTTCCGAAAAGAAATGAACAAGGAGCTGGGAGAAGTACTGGAAAATGTATTGAGAAGCTGTAAGCTTTCTGATGCAGAACTGGCCAAAGTCCTTGTTGAGGTTAACCATAAAGAAGGCAACATGGATTCAGTGTTCAATGTGCTTACTGAAATGGCCAAGGATGGTCTGCTCCCGAGAAGTGGGAGAAACACTAGTTATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119054.p1 GENE.R_Transcript_119054~~R_Transcript_119054.p1 ORF type:5prime_partial len:756 (+),score=119.90,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|7.8e-18,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|1.5e-19,PPR_2|PF13041.2|6.9e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|7e-18,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|11,PPR_1|PF12854.3|19,PPR_1|PF12854.3|3.6e-11,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|2.6e-13,PPR_1|PF12854.3|9.6e-13,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.2e-14,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|8.1e-13,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|2.3e+02,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|3.4e-08,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3e-08,PPR|PF01535.16|0.0043,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|0.00031,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|29,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|2.6e-06,PPR_3|PF13812.2|5.5e-05,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|70,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|14,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|0.48,MRP-S27|PF10037.5|2.6,MRP-S27|PF10037.5|1.1e+03,ATP13|PF12921.3|5.3e+02,ATP13|PF12921.3|0.38,ATP13|PF12921.3|67,ATP13|PF12921.3|95,ATP13|PF12921.3|47,ATP13|PF12921.3|7.2,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|2.9e+03,AEP1|PF17049.1|19,AEP1|PF17049.1|49,AEP1|PF17049.1|1.3,AEP1|PF17049.1|16 R_Transcript_119054:1-2268(+)
AHTNMRIHKYYHHYHSLSSQSHDASLADKAITYLRRHPHQLPSLFSQFSPTATSFLLLKSQFDQTLILKFLDFARSRPFFDPKSKCFSLHILTNFKLYKTAQSIAQDLAKELAAVDKNGQLVFGYLKDSYQTFNSSSAVFDLMVKSYSNLMMIDKGLNTIYLARDHGFMPGVLSYNAVIDAIIRSQGSIDQVEKLFCEMREIGVSPNVFTYNILIRGFCGAGELRKGLGFFREMERNGCLPNVVSYNTLMDAYFKVGKSNEAMKLFDSMRSKSMDPNLITYNVMVNGLCREGRMKEASELVDEMYWKGLKPDEVTFNTLVNGYCKEGNFHQALVMHSEMVKNGLSPNVVTYTSLINSMCKAGNLNRAMEFLDKMRNRGLEPNERTYTTLIDGFCQQGLMNEAYRLLNEMMESGFVPSIVTYNALIHGHCVMGRMKEAMGIIQEMTERGLTPDLVSYSTIISGFCKNHDLERAFWMKQEMVGRGIFPDAVTYSSLIKGLCEQNELAEACALFEEMLQVGLSPDEVTYTTLINAFCAEGNVKQAFHLHDEMIQKGFLPDAVTYNVLINGLNKQARTKEAKRLLLKMFYDDSVPTSITYDTLIESCTDIEFKTAVALLKGFCMKGLMTEADRLFESMLQKGHKPTEAAYNVLIHGHSKCGNLVKAYKLYKEMVHSGFIPHTVTVIALIKALFRKEMNKELGEVLENVLRSCKLSDAELAKVLVEVNHKEGNMDSVFNVLTEMAKDGLLPRSGRNTSYA*

Click here to download the sequence:
Link to NCBI Protein BLAST