Transcript Information: R_Transcript_119068.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value6E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2716141158585
Replicate 21.3103641769243
Replicate 31.7288103846153
Condition 2: 8 Hour
Replicate 11.5281454176075
Replicate 21.8498842742345
Replicate 31.8441404113601
Condition 3: 24 Hour
Replicate 11.4661008969797
Replicate 21.4724846283985
Replicate 31.5883675389621


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119068.p1 GENE.R_Transcript_119068~~R_Transcript_119068.p1 ORF type:complete len:689 (+),score=94.32,SEO_N|PF14576.2|8.2e-70,SEO_C|PF14577.2|7.1e+02,SEO_C|PF14577.2|8.4e-66 R_Transcript_119068:333-2399(+)
ATGAGCCACCGCTGGAATGAAAGCTTCTCCAGCCATTCATCGACATCTTTTGAACACGATTTTGTCATCAAGAGCATCCTTCTCAGTCATGATCCTGATGGCCGTGATCCTGACTCGGTGATGCTGCTTCGAGTGATTGAGGCCATAATGTATCATGCGACTCCATCACAAGTTTCTGCTCAGCATCAGGGCTTCTTTGATATCAGCAGCATTGAAGATGTTGACGGATTAGCAGAGCCACTTGGAAACTCAATATATCCGATATTAACCAAGATACTCTCGGAGTGCTATGGAGAGAAAAATGTGTATGCACGTACAATGTCTGTGTTGAATTTACTCGGAAACTACAGATGGGAAGCTAAAATGCTTTTAGCACTTTCAGCTTTTGTTATAGCATACGGTGAAATGTGGGTCATCACACAGTTGCAGAACCAGAATTCATTAGCTGCAGCAATCGCATTACTTAAAAGATTTCCCAGCAACTTCGAAACATTCAACCCTATCTTTACAGCACTGAATCAGTTTGTTAAAACTGCATTAGATGTGATCAGGTGTGTCAAGCAATTCGAATGTCTACCAGTCACTTATGCAGAACTGCCAGATGAAACTATCACCTGCACAAAATCATTAATATACTCTGCAGCTTACTGGGTTGTCAGAAGCATTATGGTTTGCATTTCTCTCATCAGAAATTTGAGAGCCATCAAAGATGAGCAAGATCCAAACTCAATATTAATCACAGTATGGGAGATCACAAGTTTAAAAAGCAAGATTAGCAGCATTGGGGCTCAGCTCAGGAAACAGGTAAATGTCTGTCAGCAACAATCAGAGCAAAGGATGCATAAGAAGCTCATAAATGTATTTCAGGAGAGATACTTTGACAACCAAGAAGTGCTTCGCTTCTTATTCGGTTTGAAGAGCGACTTGCCACTAAAGCAATCTTCACAGCAAGCAAAGCTTGCAATCTCCTCACTGAAAAACAAGGTCATCATACTGTTAATTTCAAGACCAGAGCTCCTGATCATTGATGAATGGCTTTTTCTGGTTCATCAAACATATGATCACCCTCTGCATGATCAGCTAGATGGAGAATATGATATTGTGTGGATGCCAATCTCACCTTCCGAGAAATGGAGTAACAAGGAAGTAAAAATTTTTAATTTTTTATCGAACTCCTTACCATGGTACTCAATTCAACAGCCATGGTCTCTCAGTTCAATAACTATCAAGTACGCAAAAGAGGAGTGGCAATTCAAAGAAAAACCAATTATGGTTGTCTTGGACTTCATTGGAAGGGTTACTAATGTAAATGCCTCTGACATGGTATCGATCTGGGGTGCGAAAGCTTACCCCTTTTCAACAACAAGAGAAAAGGAGCTGTGGAAGGAAGAGAAATGGAATCTCCCACTCTTGTTTGGCACTATTGACCCCTTGTTGACTATGTGGGTCGAAGAAGGAAGAACAATTTGCATCTACGGAAGCAACAAACTTGAATGGGTAAGAGAGTTCACTGAAAAGATCAAGGATATTCAGTACTTAGTTTCACAATTTGAGATCGTTTATGTTGGTAAGAAAGATCGAGATGAACTTGCCAAAATAGTCTCAGTCATAGACAAAGAGAAGCTAAGCCATTCTCTCTCTTTAAACAAGATATATTTCTTTTGGCGTCGTCTTGAGAGTATTAGAAGATCAAAACTCAGGCTCGGAGTCGGACAGAGCACCGACACTGAACAGATCCTAAAGCAGATAGAAAAACTGCTAGCTACCAGTTCAGCAGGCACAGCTGAAGACTGGGCCATTATTGCCACGGGTTCTTCTACAAATATGGTAAAGCTTCAAGGAAAAGAGTGGGACAAGTTCTTGGGTGAGTTCCCGAAATGCCAAAAGTATATGGCAAAAGTTGGACTAGAAGATGCTATCAGACTTTGCCTGGAACCACCTGCAACTAAGCCATGCTCTCATTCAAGAATCATTAAATACAATGAAGGGCCAATAGAAGGAACATCACTTTGTGAAATATGCAAGCATCCTATGGAGAAGTATATCGTCTATGATGTGGTGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119068.p1 GENE.R_Transcript_119068~~R_Transcript_119068.p1 ORF type:complete len:689 (+),score=94.32,SEO_N|PF14576.2|8.2e-70,SEO_C|PF14577.2|7.1e+02,SEO_C|PF14577.2|8.4e-66 R_Transcript_119068:333-2399(+)
MSHRWNESFSSHSSTSFEHDFVIKSILLSHDPDGRDPDSVMLLRVIEAIMYHATPSQVSAQHQGFFDISSIEDVDGLAEPLGNSIYPILTKILSECYGEKNVYARTMSVLNLLGNYRWEAKMLLALSAFVIAYGEMWVITQLQNQNSLAAAIALLKRFPSNFETFNPIFTALNQFVKTALDVIRCVKQFECLPVTYAELPDETITCTKSLIYSAAYWVVRSIMVCISLIRNLRAIKDEQDPNSILITVWEITSLKSKISSIGAQLRKQVNVCQQQSEQRMHKKLINVFQERYFDNQEVLRFLFGLKSDLPLKQSSQQAKLAISSLKNKVIILLISRPELLIIDEWLFLVHQTYDHPLHDQLDGEYDIVWMPISPSEKWSNKEVKIFNFLSNSLPWYSIQQPWSLSSITIKYAKEEWQFKEKPIMVVLDFIGRVTNVNASDMVSIWGAKAYPFSTTREKELWKEEKWNLPLLFGTIDPLLTMWVEEGRTICIYGSNKLEWVREFTEKIKDIQYLVSQFEIVYVGKKDRDELAKIVSVIDKEKLSHSLSLNKIYFFWRRLESIRRSKLRLGVGQSTDTEQILKQIEKLLATSSAGTAEDWAIIATGSSTNMVKLQGKEWDKFLGEFPKCQKYMAKVGLEDAIRLCLEPPATKPCSHSRIIKYNEGPIEGTSLCEICKHPMEKYIVYDVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST